Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC130360.2-201ENST00000533477 1556 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC6.78□□□□□ -1.32
COL11A1P12107 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.78□□□□□ -1.32
COL11A1P12107 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 U3.2-201ENST00000362981 210 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 RNA5SP132-201ENST00000364725 118 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 OR2AT2P-201ENST00000413438 905 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC015977.1-201ENST00000418887 292 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC015983.1-201ENST00000441577 373 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 RPS4XP14-201ENST00000493072 781 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.78□□□□□ -1.32
COL11A1P12107 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL11A1P12107 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC027334.1-201ENST00000603257 310 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 CU639417.4-201ENST00000623928 207 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC078880.4-201ENST00000617627 1749 ntBASIC6.77□□□□□ -1.32
COL11A1P12107 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.32
COL11A1P12107 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL11A1P12107 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL11A1P12107 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 LINC01616-201ENST00000561816 2280 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.77□□□□□ -1.33
COL11A1P12107 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COL11A1P12107 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
COL11A1P12107 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL11A1P12107 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 RN7SKP59-201ENST00000410520 314 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.77□□□□□ -1.33
COL11A1P12107 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL11A1P12107 AL662874.1-201ENST00000426065 230 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 FRG2FP-204ENST00000453982 852 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.77□□□□□ -1.33
COL11A1P12107 RN7SL72P-201ENST00000460697 269 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 SIAH1P1-201ENST00000479411 923 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 AC006499.3-201ENST00000506077 748 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 AC002456.2-201ENST00000509356 380 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 AC020765.1-201ENST00000604296 328 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 MIR6826-201ENST00000617808 98 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 AL445670.1-201ENST00000618889 801 ntBASIC6.77□□□□□ -1.33
COL11A1P12107 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC6.77□□□□□ -1.33
COL11A1P12107 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.77□□□□□ -1.33
COL11A1P12107 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL11A1P12107 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COL11A1P12107 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL11A1P12107 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.77□□□□□ -1.33
COL11A1P12107 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 AC119674.1-213ENST00000641177 1386 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.76□□□□□ -1.33
COL11A1P12107 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL11A1P12107 RN7SKP162-201ENST00000363605 345 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 SNORA58B-201ENST00000364259 136 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 MIR143-201ENST00000385300 106 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 MARK2P12-201ENST00000420129 585 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.76□□□□□ -1.33
COL11A1P12107 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.76□□□□□ -1.33
COL11A1P12107 AL022331.1-201ENST00000429025 477 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.76□□□□□ -1.33
COL11A1P12107 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.76□□□□□ -1.33
COL11A1P12107 AC073610.1-201ENST00000489971 396 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 TMEM97P2-201ENST00000517841 403 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.76□□□□□ -1.33
COL11A1P12107 AC067852.5-201ENST00000589299 310 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.76□□□□□ -1.33
COL11A1P12107 AC006058.1-201ENST00000568686 5067 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.76□□□□□ -1.33
COL11A1P12107 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.76□□□□□ -1.33
COL11A1P12107 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms