Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 RNU1-49P-201ENST00000363468 159 ntBASIC6.68□□□□□ -1.34
RB1P06400 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RB1P06400 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RB1P06400 U3.25-201ENST00000391209 220 ntBASIC6.68□□□□□ -1.34
RB1P06400 RPS3AP2-201ENST00000407190 754 ntBASIC6.68□□□□□ -1.34
RB1P06400 RNA5SP156-201ENST00000410250 110 ntBASIC6.68□□□□□ -1.34
RB1P06400 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.68□□□□□ -1.34
RB1P06400 RPL35AP31-201ENST00000418340 337 ntBASIC6.68□□□□□ -1.34
RB1P06400 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 BX510359.3-201ENST00000422168 306 ntBASIC6.68□□□□□ -1.34
RB1P06400 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.68□□□□□ -1.34
RB1P06400 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.68□□□□□ -1.34
RB1P06400 AL355355.1-201ENST00000442900 793 ntBASIC6.68□□□□□ -1.34
RB1P06400 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.68□□□□□ -1.34
RB1P06400 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.68□□□□□ -1.34
RB1P06400 RPSAP39-201ENST00000467439 883 ntBASIC6.68□□□□□ -1.34
RB1P06400 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.68□□□□□ -1.34
RB1P06400 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 AC114781.3-201ENST00000512083 142 ntBASIC6.68□□□□□ -1.34
RB1P06400 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 AC008676.3-201ENST00000521237 435 ntBASIC6.68□□□□□ -1.34
RB1P06400 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.68□□□□□ -1.34
RB1P06400 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RB1P06400 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.68□□□□□ -1.34
RB1P06400 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.68□□□□□ -1.34
RB1P06400 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 AP005119.1-201ENST00000580956 292 ntBASIC6.68□□□□□ -1.34
RB1P06400 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.68□□□□□ -1.34
RB1P06400 RNA5SP440-201ENST00000612665 119 ntBASIC6.68□□□□□ -1.34
RB1P06400 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.68□□□□□ -1.34
RB1P06400 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.68□□□□□ -1.34
RB1P06400 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RB1P06400 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RB1P06400 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RB1P06400 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RB1P06400 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RB1P06400 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RB1P06400 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RB1P06400 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
RB1P06400 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RB1P06400 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
RB1P06400 SHQ1P1-201ENST00000437111 1544 ntBASIC6.67□□□□□ -1.34
RB1P06400 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.67□□□□□ -1.34
RB1P06400 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RB1P06400 Z93019.1-201ENST00000416450 973 ntBASIC6.67□□□□□ -1.34
RB1P06400 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.67□□□□□ -1.34
RB1P06400 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.67□□□□□ -1.34
RB1P06400 NDUFS5P5-201ENST00000437256 321 ntBASIC6.67□□□□□ -1.34
RB1P06400 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.67□□□□□ -1.34
RB1P06400 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.67□□□□□ -1.34
RB1P06400 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.67□□□□□ -1.34
RB1P06400 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.67□□□□□ -1.34
RB1P06400 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.67□□□□□ -1.34
RB1P06400 AC002456.2-201ENST00000509356 380 ntBASIC6.67□□□□□ -1.34
RB1P06400 AC022784.5-201ENST00000522241 437 ntBASIC6.67□□□□□ -1.34
RB1P06400 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.67□□□□□ -1.34
RB1P06400 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.67□□□□□ -1.34
RB1P06400 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.67□□□□□ -1.34
RB1P06400 AP001858.2-201ENST00000536213 601 ntBASIC6.67□□□□□ -1.34
RB1P06400 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.67□□□□□ -1.34
RB1P06400 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.67□□□□□ -1.34
RB1P06400 ZNF322P1-201ENST00000568013 1209 ntBASIC6.67□□□□□ -1.34
RB1P06400 SNORD95-201ENST00000579879 68 ntBASIC6.67□□□□□ -1.34
RB1P06400 NF1P10-201ENST00000613227 742 ntBASIC6.67□□□□□ -1.34
RB1P06400 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.67□□□□□ -1.34
RB1P06400 AC096708.4-201ENST00000620563 552 ntBASIC6.67□□□□□ -1.34
RB1P06400 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RB1P06400 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
RB1P06400 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
RB1P06400 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RB1P06400 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
RB1P06400 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
RB1P06400 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms