Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC7.33□□□□□ -1.24
PDGFAP04085 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDGFAP04085 AC142086.3-201ENST00000563896 802 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AC090241.1-201ENST00000587732 621 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.33□□□□□ -1.24
PDGFAP04085 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC7.33□□□□□ -1.24
PDGFAP04085 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.33□□□□□ -1.24
PDGFAP04085 AL358335.3-201ENST00000604678 327 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.33□□□□□ -1.24
PDGFAP04085 PART1_3.1-201ENST00000619680 131 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 AC025048.6-202ENST00000627667 438 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 HYDIN2-203ENST00000614586 13885 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
PDGFAP04085 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC7.33□□□□□ -1.24
PDGFAP04085 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.33□□□□□ -1.24
PDGFAP04085 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PDGFAP04085 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.33□□□□□ -1.24
PDGFAP04085 SND1-IT1-201ENST00000623342 2481 ntBASIC7.33□□□□□ -1.24
PDGFAP04085 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 AL358913.2-201ENST00000553881 1548 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.32□□□□□ -1.24
PDGFAP04085 AC007614.2-201ENST00000569877 1851 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AL034417.4-202ENST00000642135 2236 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC7.32□□□□□ -1.24
PDGFAP04085 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 MR1-205ENST00000434571 7479 ntTSL 5 BASIC7.32□□□□□ -1.24
PDGFAP04085 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
PDGFAP04085 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
PDGFAP04085 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC7.32□□□□□ -1.24
PDGFAP04085 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PDGFAP04085 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.32□□□□□ -1.24
PDGFAP04085 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PDGFAP04085 RNU6-694P-201ENST00000364071 147 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 SUGT1P2-201ENST00000379452 992 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 SNORA51.7-201ENST00000384171 134 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.32□□□□□ -1.24
PDGFAP04085 VN1R12P-201ENST00000403778 876 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 RN7SKP26-201ENST00000410247 293 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.32□□□□□ -1.24
PDGFAP04085 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.32□□□□□ -1.24
PDGFAP04085 IPMKP1-201ENST00000425988 855 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 ISCA1P1-201ENST00000426679 387 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.32□□□□□ -1.24
PDGFAP04085 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.32□□□□□ -1.24
PDGFAP04085 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.32□□□□□ -1.24
PDGFAP04085 AC108039.2-201ENST00000440214 359 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 AC093392.2-201ENST00000450682 337 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.32□□□□□ -1.24
PDGFAP04085 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC7.32□□□□□ -1.24
PDGFAP04085 RPL34P34-201ENST00000465389 354 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AC100843.1-201ENST00000475372 550 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 RPS3P7-201ENST00000488662 726 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 MRPL49P1-201ENST00000505951 535 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.32□□□□□ -1.24
PDGFAP04085 RNU6-1004P-201ENST00000516584 111 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AC087808.1-201ENST00000520501 361 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.32□□□□□ -1.24
PDGFAP04085 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 OR4A43P-201ENST00000532938 908 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.32□□□□□ -1.24
PDGFAP04085 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.32□□□□□ -1.24
PDGFAP04085 CYP4A44P-201ENST00000569984 154 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.32□□□□□ -1.24
PDGFAP04085 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.32□□□□□ -1.24
PDGFAP04085 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.32□□□□□ -1.24
PDGFAP04085 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.32□□□□□ -1.24
PDGFAP04085 AC113554.1-201ENST00000606284 490 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AC025253.1-201ENST00000613623 543 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 U4.5-201ENST00000617137 123 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.32□□□□□ -1.24
PDGFAP04085 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PDGFAP04085 AC110769.3-201ENST00000624567 1173 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 AL139254.2-202ENST00000641937 1156 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PDGFAP04085 SALL4P7-201ENST00000555779 3120 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.32□□□□□ -1.24
PDGFAP04085 ZNF733P-202ENST00000444809 1573 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms