Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC024341.1-201ENST00000526444 1552 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 LCN1P2-201ENST00000372030 223 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX2-2O95096 OR1F12-201ENST00000402365 945 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 PRELID1P1-201ENST00000403549 660 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 CBX1P3-201ENST00000413296 527 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 HMGA1P8-201ENST00000414130 321 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.82□□□□□ -1.48
NKX2-2O95096 RPS17P17-201ENST00000419392 409 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 OSTCP4-201ENST00000424397 449 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 RPS7P14-201ENST00000426405 583 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC112492.2-201ENST00000432774 1030 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX2-2O95096 MRPS33P4-201ENST00000434892 317 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX2-2O95096 RPL12P49-201ENST00000441100 121 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 POU5F1P5-201ENST00000445059 658 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AC234771.2-201ENST00000445718 597 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AC099670.1-201ENST00000455141 783 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 RANP2-201ENST00000456833 229 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AC004890.1-201ENST00000461005 181 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 RPS7P10-201ENST00000464254 603 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AOX3P-204ENST00000491025 2107 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 OR4D12P-201ENST00000509361 911 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX2-2O95096 RPA2P3-201ENST00000533268 770 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 OR4A40P-201ENST00000533878 948 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC027229.1-201ENST00000583887 253 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.82□□□□□ -1.48
NKX2-2O95096 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX2-2O95096 NPIPB1P-202ENST00000588786 828 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AP000720.1-201ENST00000625091 483 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NKX2-2O95096 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC241584.2-201ENST00000637142 2090 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NKX2-2O95096 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX2-2O95096 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
NKX2-2O95096 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 LINC01613-201ENST00000561476 2780 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 SHQ1P1-201ENST00000437111 1544 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AC022507.1-201ENST00000548349 1505 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NKX2-2O95096 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NKX2-2O95096 RNA5SP77-201ENST00000365394 120 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-2O95096 YWHAZP4-201ENST00000392459 708 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AL157702.1-201ENST00000398764 426 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 NACAP7-201ENST00000407371 609 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 RN7SKP121-201ENST00000410842 305 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AL356968.2-201ENST00000412769 1257 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 Z82198.3-201ENST00000421145 199 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 NPM1P26-201ENST00000426339 738 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-2O95096 SEPT14P12-201ENST00000442280 560 ntBASIC5.81□□□□□ -1.48
NKX2-2O95096 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.81□□□□□ -1.48
NKX2-2O95096 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms