Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.85□□□□□ -1.47
HCN1O60741 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.85□□□□□ -1.47
HCN1O60741 AC002519.2-203ENST00000567043 837 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.85□□□□□ -1.47
HCN1O60741 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.85□□□□□ -1.47
HCN1O60741 SMIM12P1-201ENST00000603004 274 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AL583832.1-201ENST00000603227 784 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC024255.1-201ENST00000614376 102 ntBASIC5.85□□□□□ -1.47
HCN1O60741 MIR6721-201ENST00000617181 87 ntBASIC5.85□□□□□ -1.47
HCN1O60741 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.85□□□□□ -1.47
HCN1O60741 AC073592.6-201ENST00000624271 415 ntBASIC5.85□□□□□ -1.47
HCN1O60741 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.85□□□□□ -1.47
HCN1O60741 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HCN1O60741 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 AC092724.1-201ENST00000624623 3397 ntBASIC5.85□□□□□ -1.47
HCN1O60741 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.85□□□□□ -1.47
HCN1O60741 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 AC140479.2-201ENST00000421567 3130 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AL137058.3-201ENST00000624531 3099 ntBASIC5.85□□□□□ -1.47
HCN1O60741 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HCN1O60741 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.85□□□□□ -1.47
HCN1O60741 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
HCN1O60741 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.84□□□□□ -1.47
HCN1O60741 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.84□□□□□ -1.47
HCN1O60741 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.84□□□□□ -1.47
HCN1O60741 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.84□□□□□ -1.47
HCN1O60741 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HCN1O60741 RNU6-673P-201ENST00000365084 104 ntBASIC5.84□□□□□ -1.47
HCN1O60741 AC003045.1-201ENST00000398779 713 ntBASIC5.84□□□□□ -1.47
HCN1O60741 U3.43-201ENST00000410734 213 ntBASIC5.84□□□□□ -1.47
HCN1O60741 UBE2V1P14-201ENST00000415815 558 ntBASIC5.84□□□□□ -1.47
HCN1O60741 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.84□□□□□ -1.47
HCN1O60741 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.84□□□□□ -1.47
HCN1O60741 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.84□□□□□ -1.47
HCN1O60741 MED28P4-201ENST00000433137 572 ntBASIC5.84□□□□□ -1.47
HCN1O60741 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.84□□□□□ -1.47
HCN1O60741 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 AC021006.1-201ENST00000489849 553 ntBASIC5.84□□□□□ -1.47
HCN1O60741 RPL37P23-201ENST00000492641 294 ntBASIC5.84□□□□□ -1.47
HCN1O60741 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.84□□□□□ -1.47
HCN1O60741 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HCN1O60741 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.84□□□□□ -1.47
HCN1O60741 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.84□□□□□ -1.47
HCN1O60741 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.84□□□□□ -1.47
HCN1O60741 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.84□□□□□ -1.47
HCN1O60741 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.84□□□□□ -1.47
HCN1O60741 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.84□□□□□ -1.47
HCN1O60741 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.84□□□□□ -1.47
HCN1O60741 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.84□□□□□ -1.47
HCN1O60741 AC005632.2-201ENST00000564271 828 ntBASIC5.84□□□□□ -1.47
HCN1O60741 OR1E3-201ENST00000575608 948 ntBASIC5.84□□□□□ -1.47
HCN1O60741 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
HCN1O60741 AL135999.3-201ENST00000610501 812 ntBASIC5.84□□□□□ -1.47
HCN1O60741 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HCN1O60741 AL353763.1-201ENST00000624467 1628 ntBASIC5.84□□□□□ -1.47
HCN1O60741 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.84□□□□□ -1.47
HCN1O60741 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HCN1O60741 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HCN1O60741 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HCN1O60741 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
HCN1O60741 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.83□□□□□ -1.48
HCN1O60741 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 OR4G1P-202ENST00000641173 1788 ntBASIC5.83□□□□□ -1.48
HCN1O60741 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 RPL11P4-201ENST00000332269 436 ntBASIC5.83□□□□□ -1.48
HCN1O60741 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.83□□□□□ -1.48
HCN1O60741 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.83□□□□□ -1.48
HCN1O60741 CYP4F30P-202ENST00000420048 405 ntBASIC5.83□□□□□ -1.48
HCN1O60741 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.83□□□□□ -1.48
HCN1O60741 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.83□□□□□ -1.48
HCN1O60741 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.83□□□□□ -1.48
HCN1O60741 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms