Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TRIM38O00635 PSMC1P6-201ENST00000477233 1319 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 PSMC1P4-201ENST00000515236 1327 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TRIM38O00635 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM38O00635 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 RNA5SP77-201ENST00000365394 120 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TRIM38O00635 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.55□□□□□ -1.36
TRIM38O00635 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 RNA5SP431-201ENST00000410312 120 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 SEPT7P8-201ENST00000413308 775 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM38O00635 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM38O00635 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM38O00635 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM38O00635 RPL31P20-201ENST00000449593 360 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 H3F3AP5-201ENST00000475267 429 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM38O00635 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 TOMM20P1-201ENST00000534518 427 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM38O00635 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TRIM38O00635 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM38O00635 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 DYNLL1P1-201ENST00000595442 269 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 AC245052.7-201ENST00000601161 359 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM38O00635 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 AC114876.1-201ENST00000490962 1366 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 AC011504.1-201ENST00000623331 4103 ntBASIC6.55□□□□□ -1.36
TRIM38O00635 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM38O00635 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM38O00635 AC005261.2-201ENST00000593427 4258 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
TRIM38O00635 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM38O00635 RNU4-39P-201ENST00000362455 127 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 RNA5SP485-201ENST00000365053 119 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 SNORA70.3-201ENST00000365075 132 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM38O00635 SNORA70H-201ENST00000383910 135 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 SNORA70J-201ENST00000384182 135 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 SNORA40.4-201ENST00000390971 128 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 RNU6-316P-201ENST00000391027 107 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AP003170.5-201ENST00000397185 335 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 RANP6-201ENST00000413691 644 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM38O00635 AC079807.1-201ENST00000429993 481 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM38O00635 GAPDHP59-201ENST00000435908 267 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 RPS10P18-201ENST00000442662 495 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM38O00635 AL139156.3-201ENST00000454802 394 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM38O00635 OR52H2P-201ENST00000514607 902 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 RNU6-491P-201ENST00000516099 110 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM38O00635 AC084121.1-201ENST00000533882 835 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM38O00635 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM38O00635 AC026826.3-201ENST00000561747 158 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 NDUFA5P11-201ENST00000567995 343 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 RN7SL199P-201ENST00000578752 281 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 RN7SL656P-201ENST00000579044 281 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 RN7SL404P-201ENST00000582421 281 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM38O00635 AL451064.1-201ENST00000607718 471 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM38O00635 AL589743.6-201ENST00000611025 117 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM38O00635 AC010333.3-201ENST00000615100 402 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 uc_338.31-201ENST00000615595 186 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AL122023.1-201ENST00000622847 530 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AC114546.4-201ENST00000624413 369 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM38O00635 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM38O00635 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM38O00635 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM38O00635 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM38O00635 AL662795.2-201ENST00000624252 3706 ntBASIC6.54□□□□□ -1.36
TRIM38O00635 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.54□□□□□ -1.36
TRIM38O00635 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM38O00635 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM38O00635 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM38O00635 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms