Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 TNPO1P1-201ENST00000423641 1138 ntBASIC7.62□□□□□ -1.19
SOX1O00570 ZDHHC20P2-201ENST00000424108 429 ntBASIC7.62□□□□□ -1.19
SOX1O00570 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 MTCYBP3-201ENST00000445588 1137 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 AC092570.2-201ENST00000452117 1143 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AL359385.1-201ENST00000456509 365 ntBASIC7.62□□□□□ -1.19
SOX1O00570 RN7SL751P-201ENST00000473281 284 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AC096743.1-201ENST00000485172 319 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 NDUFB4P12-201ENST00000513465 390 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 AC067904.2-201ENST00000517322 1283 ntBASIC7.62□□□□□ -1.19
SOX1O00570 MTND4LP26-201ENST00000518144 282 ntBASIC7.62□□□□□ -1.19
SOX1O00570 OR5G4P-201ENST00000525251 760 ntBASIC7.62□□□□□ -1.19
SOX1O00570 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 PCNPP1-201ENST00000552501 511 ntBASIC7.62□□□□□ -1.19
SOX1O00570 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 AL133241.1-201ENST00000556832 487 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 AC091135.1-201ENST00000585943 307 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 BUB1P1-201ENST00000603541 607 ntBASIC7.62□□□□□ -1.19
SOX1O00570 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 AP003973.1-201ENST00000604639 691 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AP003392.5-201ENST00000607857 415 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AL135786.2-201ENST00000608422 615 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AL122023.1-201ENST00000622847 530 ntBASIC7.62□□□□□ -1.19
SOX1O00570 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX1O00570 AC073544.1-201ENST00000600110 1595 ntBASIC7.62□□□□□ -1.19
SOX1O00570 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 AC016251.1-201ENST00000624299 4198 ntBASIC7.62□□□□□ -1.19
SOX1O00570 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX1O00570 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX1O00570 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX1O00570 TRIM60P19-201ENST00000452879 1462 ntBASIC7.62□□□□□ -1.19
SOX1O00570 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.62□□□□□ -1.19
SOX1O00570 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 MAPK10-279ENST00000641157 2449 ntBASIC7.61□□□□□ -1.19
SOX1O00570 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SOX1O00570 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 AC138409.1-201ENST00000505001 3598 ntBASIC7.61□□□□□ -1.19
SOX1O00570 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SOX1O00570 ANKRD36P1-201ENST00000344424 659 ntBASIC7.61□□□□□ -1.19
SOX1O00570 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SOX1O00570 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.61□□□□□ -1.19
SOX1O00570 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 AL590084.1-201ENST00000407885 387 ntBASIC7.61□□□□□ -1.19
SOX1O00570 SEPT7P8-201ENST00000413308 775 ntBASIC7.61□□□□□ -1.19
SOX1O00570 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX1O00570 OR6C64P-201ENST00000419708 825 ntBASIC7.61□□□□□ -1.19
SOX1O00570 EIF4A1P1-201ENST00000420241 934 ntBASIC7.61□□□□□ -1.19
SOX1O00570 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX1O00570 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.61□□□□□ -1.19
SOX1O00570 AC099340.1-201ENST00000475247 599 ntBASIC7.61□□□□□ -1.19
SOX1O00570 RN7SL629P-201ENST00000489622 285 ntBASIC7.61□□□□□ -1.19
SOX1O00570 AC008837.1-201ENST00000511513 412 ntBASIC7.61□□□□□ -1.19
SOX1O00570 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.61□□□□□ -1.19
SOX1O00570 MTCYBP44-201ENST00000514835 823 ntBASIC7.61□□□□□ -1.19
SOX1O00570 SCARNA20.1-201ENST00000516009 138 ntBASIC7.61□□□□□ -1.19
SOX1O00570 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.61□□□□□ -1.19
SOX1O00570 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 ELOCP32-201ENST00000548625 324 ntBASIC7.61□□□□□ -1.19
SOX1O00570 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX1O00570 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
SOX1O00570 AC107993.1-201ENST00000591343 684 ntBASIC7.61□□□□□ -1.19
SOX1O00570 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX1O00570 AC010738.1-201ENST00000604970 987 ntBASIC7.61□□□□□ -1.19
SOX1O00570 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX1O00570 MIR6826-201ENST00000617808 98 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms