Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.96□□□□□ -1.45
PDLIM1O00151 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PDLIM1O00151 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PDLIM1O00151 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.96□□□□□ -1.45
PDLIM1O00151 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDLIM1O00151 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM1O00151 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 AL161756.3-201ENST00000641216 2071 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM1O00151 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PDLIM1O00151 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
PDLIM1O00151 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AL096800.1-201ENST00000405326 893 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 AL358178.1-201ENST00000407698 397 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AC022080.2-201ENST00000452932 533 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM1O00151 RPL5P33-201ENST00000487833 905 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.96□□□□□ -1.46
PDLIM1O00151 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM1O00151 OR52H2P-201ENST00000514607 902 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.96□□□□□ -1.46
PDLIM1O00151 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM1O00151 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM1O00151 AC068408.1-201ENST00000577406 1144 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 GLYATL1P2-202ENST00000588046 902 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 AC069542.2-201ENST00000624816 216 ntBASIC5.96□□□□□ -1.46
PDLIM1O00151 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM1O00151 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM1O00151 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM1O00151 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PDLIM1O00151 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM1O00151 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 CASC19-248ENST00000641674 1356 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.95□□□□□ -1.46
PDLIM1O00151 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC006509.1-201ENST00000420788 634 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC125238.2-201ENST00000430003 1440 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 AC099670.2-201ENST00000435130 321 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC234771.4-201ENST00000441416 730 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 AC092106.1-201ENST00000444291 373 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 RPL26P30-201ENST00000453533 435 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 RN7SKP198-201ENST00000459286 306 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC099340.1-201ENST00000475247 599 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 RPS4XP17-201ENST00000479057 754 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 AC022206.1-201ENST00000495947 347 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 AC009567.2-201ENST00000502989 349 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 AC114324.2-202ENST00000503812 134 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.95□□□□□ -1.46
PDLIM1O00151 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.95□□□□□ -1.46
PDLIM1O00151 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC007842.1-201ENST00000597336 2039 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.95□□□□□ -1.46
PDLIM1O00151 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC008833.1-201ENST00000611633 691 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC127071.2-201ENST00000623293 527 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.95□□□□□ -1.46
PDLIM1O00151 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.95□□□□□ -1.46
PDLIM1O00151 MAPK10-328ENST00000641553 4009 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDLIM1O00151 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDLIM1O00151 AC104260.2-201ENST00000623551 3497 ntBASIC5.95□□□□□ -1.46
PDLIM1O00151 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms