Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 VN1R20P-201ENST00000425215 966 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AL590399.2-201ENST00000427536 309 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AC073410.1-201ENST00000435125 589 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AL590004.3-202ENST00000445883 451 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 RPS7P10-201ENST00000464254 603 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 RPL12P30-201ENST00000488389 499 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AC119403.2-201ENST00000590960 598 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AC007603.3-201ENST00000636915 979 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 KYNUP3-201ENST00000574386 1341 ntBASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAV27A0A087WT01 AC015799.1-201ENST00000622996 3122 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC239868.2-201ENST00000564237 4527 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AL133260.1-201ENST00000405720 405 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 LINC00328-2P-201ENST00000436585 219 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC016027.4-201ENST00000450866 277 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 SDC4P-201ENST00000453285 601 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 HMGN1P16-201ENST00000508308 283 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 ZNF519P4-201ENST00000514008 125 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 OR56A7P-201ENST00000524865 941 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 NPIPB14P-203ENST00000532298 987 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 NDUFB9P1-201ENST00000604683 510 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 MIR6823-201ENST00000622118 61 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 MARK2P4-201ENST00000503381 2380 ntBASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAV27A0A087WT01 AP002512.4-202ENST00000641599 4530 ntBASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 THAP12P9-201ENST00000503971 2360 ntBASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.42□□□□□ -1.54
TRAV27A0A087WT01 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms