Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 UNC93B5-201ENST00000530315 699 ntBASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NECTIN3Q9NQS3 DPP3P2-201ENST00000416030 1696 ntBASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 TSPY20P-201ENST00000450910 630 ntBASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.89■□□□□ 0.61
NECTIN3Q9NQS3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 AIRN-201ENST00000601203 4374 ntBASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NECTIN3Q9NQS3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.87■□□□□ 0.61
NECTIN3Q9NQS3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms