Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 NBPF21P-201ENST00000425093 1451 ntBASIC23.34■■□□□ 1.33
RNF41Q9H4P4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 TMEM179-206ENST00000616017 1645 ntBASIC23.33■■□□□ 1.33
RNF41Q9H4P4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 AC110285.5-201ENST00000611501 352 ntBASIC23.33■■□□□ 1.33
RNF41Q9H4P4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF41Q9H4P4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RNF41Q9H4P4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF41Q9H4P4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
RNF41Q9H4P4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF41Q9H4P4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 AC112907.3-201ENST00000577781 2400 ntBASIC23.32■■□□□ 1.32
RNF41Q9H4P4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 FAM197Y4-202ENST00000622692 608 ntBASIC23.32■■□□□ 1.32
RNF41Q9H4P4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF41Q9H4P4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 YBX1P10-201ENST00000444752 975 ntBASIC23.31■■□□□ 1.32
RNF41Q9H4P4 AL158047.1-201ENST00000445918 881 ntBASIC23.31■■□□□ 1.32
RNF41Q9H4P4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF41Q9H4P4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 AC004264.1-201ENST00000608354 794 ntBASIC23.3■■□□□ 1.32
RNF41Q9H4P4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF41Q9H4P4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF41Q9H4P4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms