Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 CD177P1-201ENST00000606252 935 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AL353708.3-201ENST00000610272 989 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AC026471.5-201ENST00000615068 467 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AL121829.2-201ENST00000620908 328 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AC073912.3-201ENST00000624414 853 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 KRT8P20-201ENST00000423953 1409 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AP005212.1-201ENST00000581547 1997 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AC079598.2-202ENST00000546624 1451 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AC018553.1-201ENST00000616682 1458 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 MAX-217ENST00000557277 728 ntTSL 3 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 RARRES2P10-201ENST00000564312 460 ntBASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 AP000525.1-201ENST00000608286 694 ntBASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 CR392000.1-201ENST00000624770 1228 ntBASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
KRTAP4-3Q9BYR4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
KRTAP4-3Q9BYR4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms