Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL441883.1-201ENST00000566170 1045 ntBASIC19.47■□□□□ 0.71
CFAP54Q96N23 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP54Q96N23 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP54Q96N23 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP54Q96N23 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.47■□□□□ 0.71
CFAP54Q96N23 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CFAP54Q96N23 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CFAP54Q96N23 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CFAP54Q96N23 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CFAP54Q96N23 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.46■□□□□ 0.71
CFAP54Q96N23 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.46■□□□□ 0.71
CFAP54Q96N23 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CFAP54Q96N23 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CFAP54Q96N23 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP54Q96N23 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.45■□□□□ 0.7
CFAP54Q96N23 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 AC007663.1-201ENST00000438948 1240 ntBASIC19.45■□□□□ 0.7
CFAP54Q96N23 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.45■□□□□ 0.7
CFAP54Q96N23 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.45■□□□□ 0.7
CFAP54Q96N23 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.45■□□□□ 0.7
CFAP54Q96N23 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CFAP54Q96N23 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CFAP54Q96N23 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.45■□□□□ 0.7
CFAP54Q96N23 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.45■□□□□ 0.7
CFAP54Q96N23 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.45■□□□□ 0.7
CFAP54Q96N23 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP54Q96N23 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 AC004870.1-201ENST00000315132 882 ntBASIC19.44■□□□□ 0.7
CFAP54Q96N23 AC004951.3-201ENST00000418645 1148 ntBASIC19.44■□□□□ 0.7
CFAP54Q96N23 AC011506.1-201ENST00000474329 610 ntBASIC19.44■□□□□ 0.7
CFAP54Q96N23 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP54Q96N23 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CFAP54Q96N23 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.44■□□□□ 0.7
CFAP54Q96N23 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 SLC25A1P2-201ENST00000430693 912 ntBASIC19.44■□□□□ 0.7
CFAP54Q96N23 AL160237.2-201ENST00000556165 472 ntBASIC19.44■□□□□ 0.7
CFAP54Q96N23 IFNL4P1-201ENST00000607083 540 ntBASIC19.44■□□□□ 0.7
CFAP54Q96N23 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CFAP54Q96N23 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP54Q96N23 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP54Q96N23 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP54Q96N23 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 PRSS44-201ENST00000515154 1146 ntBASIC19.43■□□□□ 0.7
CFAP54Q96N23 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP54Q96N23 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP54Q96N23 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP54Q96N23 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP54Q96N23 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP54Q96N23 MIR574-201ENST00000385209 96 ntBASIC19.43■□□□□ 0.7
CFAP54Q96N23 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFAP54Q96N23 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 AL662844.1-201ENST00000546340 181 ntBASIC19.43■□□□□ 0.7
CFAP54Q96N23 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.43■□□□□ 0.7
CFAP54Q96N23 AL356652.1-201ENST00000615962 565 ntBASIC19.43■□□□□ 0.7
CFAP54Q96N23 AC092338.2-201ENST00000568827 1415 ntBASIC19.43■□□□□ 0.7
CFAP54Q96N23 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms