Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
PHACTR3Q96KR7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 YBX1P10-201ENST00000444752 975 ntBASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 AC073195.1-201ENST00000607241 877 ntBASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.96■■□□□ 1.75
PHACTR3Q96KR7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PHACTR3Q96KR7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC25.95■■□□□ 1.75
PHACTR3Q96KR7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.95■■□□□ 1.75
PHACTR3Q96KR7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.95■■□□□ 1.75
PHACTR3Q96KR7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 C1QL1P1-201ENST00000568105 661 ntBASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PHACTR3Q96KR7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 AC026471.5-201ENST00000615068 467 ntBASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PHACTR3Q96KR7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 NIFKP9-201ENST00000419265 221 ntBASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 AL353807.1-201ENST00000427475 662 ntBASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 MIR4785-201ENST00000585005 73 ntBASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PHACTR3Q96KR7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 TMEM179-206ENST00000616017 1645 ntBASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 KRT17P2-201ENST00000300992 1314 ntBASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHACTR3Q96KR7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms