Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE4Q96A23 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE4Q96A23 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE4Q96A23 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE4Q96A23 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE4Q96A23 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE4Q96A23 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 AC142381.4-202ENST00000563973 229 ntBASIC17.72■□□□□ 0.43
CPNE4Q96A23 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE4Q96A23 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPNE4Q96A23 AC073130.3-201ENST00000624389 2278 ntBASIC17.72■□□□□ 0.43
CPNE4Q96A23 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE4Q96A23 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 AP001271.2-201ENST00000624018 1556 ntBASIC17.71■□□□□ 0.43
CPNE4Q96A23 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 AC098590.1-201ENST00000468126 897 ntBASIC17.71■□□□□ 0.43
CPNE4Q96A23 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 FAM197Y4-202ENST00000622692 608 ntBASIC17.71■□□□□ 0.43
CPNE4Q96A23 AL023875.1-201ENST00000640777 796 ntBASIC17.71■□□□□ 0.43
CPNE4Q96A23 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE4Q96A23 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CPNE4Q96A23 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CPNE4Q96A23 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CPNE4Q96A23 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.71■□□□□ 0.42
CPNE4Q96A23 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPNE4Q96A23 AC018553.1-201ENST00000616682 1458 ntBASIC17.7■□□□□ 0.42
CPNE4Q96A23 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 GCSHP5-201ENST00000443090 522 ntBASIC17.7■□□□□ 0.42
CPNE4Q96A23 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 RPPH1-201ENST00000516869 333 ntBASIC17.7■□□□□ 0.42
CPNE4Q96A23 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPNE4Q96A23 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE4Q96A23 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms