Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.41□□□□□ -0.26
ALMS1Q8TCU4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 TSPY17P-201ENST00000450329 467 ntBASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 AC141257.4-201ENST00000634557 245 ntBASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 AC136944.6-201ENST00000634818 245 ntBASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ALMS1Q8TCU4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AP006587.1-201ENST00000534129 1502 ntBASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 GCSHP2-201ENST00000560971 527 ntBASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AC006538.3-201ENST00000612495 578 ntBASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 GOLGA2P6-201ENST00000340929 2049 ntBASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AC018553.1-201ENST00000616682 1458 ntBASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 ATP5G2P1-201ENST00000433580 426 ntBASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AL512604.3-201ENST00000569583 964 ntBASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ALMS1Q8TCU4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 EMBP1-201ENST00000458200 901 ntBASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.38□□□□□ -0.27
ALMS1Q8TCU4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms