Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.39■■□□□ 1.18
RETREG2Q8NC44 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
RETREG2Q8NC44 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RETREG2Q8NC44 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RETREG2Q8NC44 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 TSPY15P-201ENST00000457163 923 ntBASIC22.39■■□□□ 1.17
RETREG2Q8NC44 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RETREG2Q8NC44 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 AL512408.1-201ENST00000569378 2000 ntBASIC22.38■■□□□ 1.17
RETREG2Q8NC44 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RETREG2Q8NC44 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 AC023632.3-201ENST00000521633 145 ntBASIC22.37■■□□□ 1.17
RETREG2Q8NC44 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RETREG2Q8NC44 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 AL355075.4-201ENST00000554988 638 ntBASIC22.36■■□□□ 1.17
RETREG2Q8NC44 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RETREG2Q8NC44 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RETREG2Q8NC44 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RETREG2Q8NC44 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RETREG2Q8NC44 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RETREG2Q8NC44 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RETREG2Q8NC44 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms