Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 Z85996.1-201ENST00000494644 937 ntBASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 NPAP1P7-201ENST00000613027 823 ntBASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SNAPC4Q5SXM2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC32.52■■■□□ 2.8
SNAPC4Q5SXM2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
SNAPC4Q5SXM2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SNAPC4Q5SXM2 PRSS44-201ENST00000515154 1146 ntBASIC32.52■■■□□ 2.8
SNAPC4Q5SXM2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC32.52■■■□□ 2.8
SNAPC4Q5SXM2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC32.52■■■□□ 2.8
SNAPC4Q5SXM2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC32.52■■■□□ 2.8
SNAPC4Q5SXM2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
SNAPC4Q5SXM2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC32.51■■■□□ 2.8
SNAPC4Q5SXM2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC32.51■■■□□ 2.8
SNAPC4Q5SXM2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
SNAPC4Q5SXM2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.8
SNAPC4Q5SXM2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
SNAPC4Q5SXM2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 AC023511.2-201ENST00000618803 211 ntBASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 GUSBP5-202ENST00000510805 1989 ntBASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC32.51■■■□□ 2.79
SNAPC4Q5SXM2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 AC112907.2-201ENST00000448639 330 ntBASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 KRT8P17-201ENST00000453110 1448 ntBASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
SNAPC4Q5SXM2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 TSPY17P-201ENST00000450329 467 ntBASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 AL353719.1-201ENST00000566847 864 ntBASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 AL031432.5-201ENST00000641059 760 ntBASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 GOLGA6L3-201ENST00000507199 1679 ntBASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SNAPC4Q5SXM2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 HYMAI.1-201ENST00000620949 238 ntBASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 ZNF444P1-201ENST00000559497 298 ntBASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC32.48■■■□□ 2.79
SNAPC4Q5SXM2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 SPDYE13P-201ENST00000445314 798 ntBASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC32.47■■■□□ 2.79
SNAPC4Q5SXM2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
SNAPC4Q5SXM2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC32.46■■■□□ 2.79
SNAPC4Q5SXM2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SNAPC4Q5SXM2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
SNAPC4Q5SXM2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SNAPC4Q5SXM2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC32.46■■■□□ 2.79
SNAPC4Q5SXM2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC32.46■■■□□ 2.79
SNAPC4Q5SXM2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms