Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.97■□□□□ 0.95
VARS2Q5ST30 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VARS2Q5ST30 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.96■□□□□ 0.95
VARS2Q5ST30 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VARS2Q5ST30 AC020907.5-201ENST00000624372 1936 ntBASIC20.96■□□□□ 0.95
VARS2Q5ST30 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.96■□□□□ 0.95
VARS2Q5ST30 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
VARS2Q5ST30 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
VARS2Q5ST30 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.96■□□□□ 0.95
VARS2Q5ST30 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VARS2Q5ST30 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VARS2Q5ST30 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.96■□□□□ 0.95
VARS2Q5ST30 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.96■□□□□ 0.95
VARS2Q5ST30 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VARS2Q5ST30 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VARS2Q5ST30 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VARS2Q5ST30 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VARS2Q5ST30 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VARS2Q5ST30 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.96■□□□□ 0.95
VARS2Q5ST30 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.95■□□□□ 0.95
VARS2Q5ST30 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
VARS2Q5ST30 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.95■□□□□ 0.94
VARS2Q5ST30 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VARS2Q5ST30 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.95■□□□□ 0.94
VARS2Q5ST30 MMP23A-201ENST00000234610 1017 ntBASIC20.95■□□□□ 0.94
VARS2Q5ST30 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.95■□□□□ 0.94
VARS2Q5ST30 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.95■□□□□ 0.94
VARS2Q5ST30 TUBB8P6-201ENST00000436895 1288 ntBASIC20.95■□□□□ 0.94
VARS2Q5ST30 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VARS2Q5ST30 AC012306.2-201ENST00000609350 630 ntBASIC20.95■□□□□ 0.94
VARS2Q5ST30 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.95■□□□□ 0.94
VARS2Q5ST30 AC097493.4-201ENST00000641197 219 ntBASIC20.95■□□□□ 0.94
VARS2Q5ST30 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VARS2Q5ST30 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VARS2Q5ST30 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VARS2Q5ST30 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VARS2Q5ST30 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARS2Q5ST30 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 AC079598.2-202ENST00000546624 1451 ntBASIC20.94■□□□□ 0.94
VARS2Q5ST30 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARS2Q5ST30 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 AC116562.2-201ENST00000507042 360 ntBASIC20.94■□□□□ 0.94
VARS2Q5ST30 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VARS2Q5ST30 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VARS2Q5ST30 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARS2Q5ST30 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARS2Q5ST30 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VARS2Q5ST30 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.94■□□□□ 0.94
VARS2Q5ST30 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 AC073314.1-201ENST00000568729 2216 ntBASIC20.93■□□□□ 0.94
VARS2Q5ST30 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 UNC93B2-201ENST00000285383 730 ntBASIC20.93■□□□□ 0.94
VARS2Q5ST30 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 AP000525.1-201ENST00000608286 694 ntBASIC20.93■□□□□ 0.94
VARS2Q5ST30 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARS2Q5ST30 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.93■□□□□ 0.94
VARS2Q5ST30 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.92■□□□□ 0.94
VARS2Q5ST30 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.92■□□□□ 0.94
VARS2Q5ST30 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
VARS2Q5ST30 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VARS2Q5ST30 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VARS2Q5ST30 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.92■□□□□ 0.94
VARS2Q5ST30 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.92■□□□□ 0.94
VARS2Q5ST30 AL445675.2-201ENST00000620291 557 ntBASIC20.92■□□□□ 0.94
VARS2Q5ST30 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARS2Q5ST30 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms