Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 DUX4L8-201ENST00000629013 1275 ntBASIC18■□□□□ 0.47
CXCR4P61073 DUX4L3-201ENST00000630187 1275 ntBASIC18■□□□□ 0.47
CXCR4P61073 DUX4L7-201ENST00000630678 1275 ntBASIC18■□□□□ 0.47
CXCR4P61073 DUX4L5-201ENST00000630834 1275 ntBASIC18■□□□□ 0.47
CXCR4P61073 RALB-208ENST00000631312 311 ntTSL 5 BASIC18■□□□□ 0.47
CXCR4P61073 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CXCR4P61073 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18■□□□□ 0.47
CXCR4P61073 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CXCR4P61073 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCR4P61073 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCR4P61073 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCR4P61073 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCR4P61073 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCR4P61073 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CXCR4P61073 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CXCR4P61073 AL390961.4-201ENST00000623958 2535 ntBASIC18■□□□□ 0.47
CXCR4P61073 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CXCR4P61073 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18■□□□□ 0.47
CXCR4P61073 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CXCR4P61073 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18■□□□□ 0.47
CXCR4P61073 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCR4P61073 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCR4P61073 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCR4P61073 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CXCR4P61073 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CXCR4P61073 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCR4P61073 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CXCR4P61073 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCR4P61073 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CXCR4P61073 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.99■□□□□ 0.47
CXCR4P61073 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.99■□□□□ 0.47
CXCR4P61073 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.98■□□□□ 0.47
CXCR4P61073 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.98■□□□□ 0.47
CXCR4P61073 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.98■□□□□ 0.47
CXCR4P61073 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CXCR4P61073 AC027612.3-201ENST00000413684 1047 ntBASIC17.98■□□□□ 0.47
CXCR4P61073 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.98■□□□□ 0.47
CXCR4P61073 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.98■□□□□ 0.47
CXCR4P61073 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.98■□□□□ 0.47
CXCR4P61073 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.98■□□□□ 0.47
CXCR4P61073 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CXCR4P61073 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.98■□□□□ 0.47
CXCR4P61073 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.98■□□□□ 0.47
CXCR4P61073 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.98■□□□□ 0.47
CXCR4P61073 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.98■□□□□ 0.47
CXCR4P61073 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CXCR4P61073 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CXCR4P61073 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.98■□□□□ 0.47
CXCR4P61073 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CXCR4P61073 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.97■□□□□ 0.47
CXCR4P61073 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CXCR4P61073 AC009113.1-201ENST00000570267 2443 ntBASIC17.97■□□□□ 0.47
CXCR4P61073 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.97■□□□□ 0.47
CXCR4P61073 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.97■□□□□ 0.47
CXCR4P61073 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CXCR4P61073 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.97■□□□□ 0.47
CXCR4P61073 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CXCR4P61073 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.97■□□□□ 0.47
CXCR4P61073 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.97■□□□□ 0.47
CXCR4P61073 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CXCR4P61073 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.96■□□□□ 0.47
CXCR4P61073 LINC02228-203ENST00000641970 1355 ntBASIC17.96■□□□□ 0.47
CXCR4P61073 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.96■□□□□ 0.47
CXCR4P61073 AP001160.3-201ENST00000601484 763 ntBASIC17.96■□□□□ 0.47
CXCR4P61073 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.96■□□□□ 0.47
CXCR4P61073 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 AC020916.1-201ENST00000587762 1774 ntBASIC17.96■□□□□ 0.47
CXCR4P61073 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CXCR4P61073 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms