Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATN1P54259 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATN1P54259 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATN1P54259 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATN1P54259 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ATN1P54259 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.83■■□□□ 1.09
ATN1P54259 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.83■■□□□ 1.09
ATN1P54259 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.83■■□□□ 1.09
ATN1P54259 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ATN1P54259 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.83■■□□□ 1.09
ATN1P54259 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATN1P54259 AC004951.3-201ENST00000418645 1148 ntBASIC21.83■■□□□ 1.09
ATN1P54259 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.09
ATN1P54259 YBX1P10-201ENST00000444752 975 ntBASIC21.83■■□□□ 1.09
ATN1P54259 AL359075.1-203ENST00000462729 1002 ntBASIC21.83■■□□□ 1.09
ATN1P54259 KRT18P16-201ENST00000510337 1294 ntBASIC21.83■■□□□ 1.09
ATN1P54259 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.83■■□□□ 1.09
ATN1P54259 CLEC4GP1-201ENST00000596555 870 ntBASIC21.83■■□□□ 1.09
ATN1P54259 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.83■■□□□ 1.09
ATN1P54259 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.83■■□□□ 1.08
ATN1P54259 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
ATN1P54259 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
ATN1P54259 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATN1P54259 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATN1P54259 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
ATN1P54259 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
ATN1P54259 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.82■■□□□ 1.08
ATN1P54259 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ATN1P54259 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ATN1P54259 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.82■■□□□ 1.08
ATN1P54259 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.82■■□□□ 1.08
ATN1P54259 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.82■■□□□ 1.08
ATN1P54259 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATN1P54259 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
ATN1P54259 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.82■■□□□ 1.08
ATN1P54259 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ATN1P54259 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATN1P54259 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ATN1P54259 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.82■■□□□ 1.08
ATN1P54259 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.82■■□□□ 1.08
ATN1P54259 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATN1P54259 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATN1P54259 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ATN1P54259 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.81■■□□□ 1.08
ATN1P54259 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.81■■□□□ 1.08
ATN1P54259 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
ATN1P54259 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ATN1P54259 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ATN1P54259 SLC25A1P2-201ENST00000430693 912 ntBASIC21.81■■□□□ 1.08
ATN1P54259 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 AL671277.2-201ENST00000458060 996 ntBASIC21.81■■□□□ 1.08
ATN1P54259 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.81■■□□□ 1.08
ATN1P54259 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.81■■□□□ 1.08
ATN1P54259 AL121603.2-201ENST00000557373 2117 ntBASIC21.81■■□□□ 1.08
ATN1P54259 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.81■■□□□ 1.08
ATN1P54259 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ATN1P54259 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATN1P54259 TFP1-202ENST00000475455 1573 ntBASIC21.81■■□□□ 1.08
ATN1P54259 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
ATN1P54259 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.81■■□□□ 1.08
ATN1P54259 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.81■■□□□ 1.08
ATN1P54259 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.8■■□□□ 1.08
ATN1P54259 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.8■■□□□ 1.08
ATN1P54259 AC116351.2-201ENST00000606540 1585 ntBASIC21.8■■□□□ 1.08
ATN1P54259 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ATN1P54259 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.8■■□□□ 1.08
ATN1P54259 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.8■■□□□ 1.08
ATN1P54259 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.8■■□□□ 1.08
ATN1P54259 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.8■■□□□ 1.08
ATN1P54259 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
ATN1P54259 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.8■■□□□ 1.08
ATN1P54259 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATN1P54259 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.79■■□□□ 1.08
ATN1P54259 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATN1P54259 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATN1P54259 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATN1P54259 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATN1P54259 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATN1P54259 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATN1P54259 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATN1P54259 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATN1P54259 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms