Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.58■□□□□ 0.72
LIMK1P53667 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.58■□□□□ 0.72
LIMK1P53667 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.58■□□□□ 0.72
LIMK1P53667 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.58■□□□□ 0.72
LIMK1P53667 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.58■□□□□ 0.72
LIMK1P53667 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.58■□□□□ 0.72
LIMK1P53667 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
LIMK1P53667 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.58■□□□□ 0.72
LIMK1P53667 DGCR10-201ENST00000609839 495 ntBASIC19.58■□□□□ 0.72
LIMK1P53667 AL031985.4-201ENST00000642138 673 ntBASIC19.58■□□□□ 0.72
LIMK1P53667 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIMK1P53667 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.58■□□□□ 0.72
LIMK1P53667 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.58■□□□□ 0.72
LIMK1P53667 AL157384.1-201ENST00000445995 2473 ntBASIC19.58■□□□□ 0.72
LIMK1P53667 AC124283.5-201ENST00000624661 1809 ntBASIC19.58■□□□□ 0.72
LIMK1P53667 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LIMK1P53667 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
LIMK1P53667 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LIMK1P53667 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 AL450487.1-201ENST00000426799 995 ntBASIC19.57■□□□□ 0.72
LIMK1P53667 AC091390.4-202ENST00000476426 537 ntBASIC19.57■□□□□ 0.72
LIMK1P53667 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
LIMK1P53667 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.57■□□□□ 0.72
LIMK1P53667 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.57■□□□□ 0.72
LIMK1P53667 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.57■□□□□ 0.72
LIMK1P53667 AC026271.3-201ENST00000571884 352 ntBASIC19.57■□□□□ 0.72
LIMK1P53667 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.57■□□□□ 0.72
LIMK1P53667 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIMK1P53667 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.57■□□□□ 0.72
LIMK1P53667 LINC01521-201ENST00000504184 1943 ntBASIC19.57■□□□□ 0.72
LIMK1P53667 AC026471.6-201ENST00000622954 1905 ntBASIC19.57■□□□□ 0.72
LIMK1P53667 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK1P53667 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.56■□□□□ 0.72
LIMK1P53667 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK1P53667 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK1P53667 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.56■□□□□ 0.72
LIMK1P53667 DUSP5P1-201ENST00000441325 1139 ntBASIC19.56■□□□□ 0.72
LIMK1P53667 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.56■□□□□ 0.72
LIMK1P53667 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.56■□□□□ 0.72
LIMK1P53667 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK1P53667 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK1P53667 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.56■□□□□ 0.72
LIMK1P53667 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK1P53667 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIMK1P53667 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.56■□□□□ 0.72
LIMK1P53667 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.56■□□□□ 0.72
LIMK1P53667 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK1P53667 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK1P53667 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK1P53667 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.55■□□□□ 0.72
LIMK1P53667 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 RNF152P1-201ENST00000397754 604 ntBASIC19.55■□□□□ 0.72
LIMK1P53667 AC117947.1-201ENST00000427448 529 ntBASIC19.55■□□□□ 0.72
LIMK1P53667 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK1P53667 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK1P53667 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LIMK1P53667 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.55■□□□□ 0.72
LIMK1P53667 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LIMK1P53667 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.55■□□□□ 0.72
LIMK1P53667 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIMK1P53667 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.55■□□□□ 0.72
LIMK1P53667 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LIMK1P53667 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK1P53667 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK1P53667 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK1P53667 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK1P53667 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.54■□□□□ 0.72
LIMK1P53667 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.54■□□□□ 0.72
LIMK1P53667 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LIMK1P53667 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LIMK1P53667 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LIMK1P53667 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LIMK1P53667 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LIMK1P53667 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.54■□□□□ 0.72
LIMK1P53667 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.54■□□□□ 0.72
LIMK1P53667 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms