Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL353807.1-201ENST00000427475 662 ntBASIC18.77■□□□□ 0.6
GABRA4P48169 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GABRA4P48169 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.77■□□□□ 0.6
GABRA4P48169 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.77■□□□□ 0.6
GABRA4P48169 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.77■□□□□ 0.6
GABRA4P48169 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.77■□□□□ 0.6
GABRA4P48169 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.77■□□□□ 0.6
GABRA4P48169 AL691432.2-201ENST00000607222 2038 ntBASIC18.77■□□□□ 0.6
GABRA4P48169 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABRA4P48169 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.77■□□□□ 0.6
GABRA4P48169 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GABRA4P48169 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
GABRA4P48169 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GABRA4P48169 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.76■□□□□ 0.59
GABRA4P48169 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GABRA4P48169 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABRA4P48169 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABRA4P48169 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABRA4P48169 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.76■□□□□ 0.59
GABRA4P48169 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
GABRA4P48169 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.76■□□□□ 0.59
GABRA4P48169 C1QL1P1-201ENST00000568105 661 ntBASIC18.76■□□□□ 0.59
GABRA4P48169 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.76■□□□□ 0.59
GABRA4P48169 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.76■□□□□ 0.59
GABRA4P48169 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABRA4P48169 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GABRA4P48169 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GABRA4P48169 AL157384.1-201ENST00000445995 2473 ntBASIC18.76■□□□□ 0.59
GABRA4P48169 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GABRA4P48169 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.75■□□□□ 0.59
GABRA4P48169 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.75■□□□□ 0.59
GABRA4P48169 LINC01006-201ENST00000333319 2292 ntBASIC18.75■□□□□ 0.59
GABRA4P48169 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.75■□□□□ 0.59
GABRA4P48169 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.75■□□□□ 0.59
GABRA4P48169 AC099778.1-201ENST00000568593 1911 ntBASIC18.75■□□□□ 0.59
GABRA4P48169 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.75■□□□□ 0.59
GABRA4P48169 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GABRA4P48169 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.75■□□□□ 0.59
GABRA4P48169 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.75■□□□□ 0.59
GABRA4P48169 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.75■□□□□ 0.59
GABRA4P48169 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.75■□□□□ 0.59
GABRA4P48169 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.75■□□□□ 0.59
GABRA4P48169 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.75■□□□□ 0.59
GABRA4P48169 AC073195.1-201ENST00000607241 877 ntBASIC18.75■□□□□ 0.59
GABRA4P48169 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GABRA4P48169 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.75■□□□□ 0.59
GABRA4P48169 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 AP001271.2-201ENST00000624018 1556 ntBASIC18.75■□□□□ 0.59
GABRA4P48169 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GABRA4P48169 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.74■□□□□ 0.59
GABRA4P48169 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.74■□□□□ 0.59
GABRA4P48169 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 AL391422.3-201ENST00000603791 2761 ntBASIC18.74■□□□□ 0.59
GABRA4P48169 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.74■□□□□ 0.59
GABRA4P48169 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
GABRA4P48169 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
GABRA4P48169 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.74■□□□□ 0.59
GABRA4P48169 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.74■□□□□ 0.59
GABRA4P48169 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
GABRA4P48169 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.74■□□□□ 0.59
GABRA4P48169 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GABRA4P48169 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GABRA4P48169 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.74■□□□□ 0.59
GABRA4P48169 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.73■□□□□ 0.59
GABRA4P48169 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.73■□□□□ 0.59
GABRA4P48169 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GABRA4P48169 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GABRA4P48169 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 NIFKP9-201ENST00000419265 221 ntBASIC18.73■□□□□ 0.59
GABRA4P48169 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.73■□□□□ 0.59
GABRA4P48169 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.73■□□□□ 0.59
GABRA4P48169 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms