Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC1A3P43003 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A3P43003 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A3P43003 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A3P43003 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A3P43003 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A3P43003 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A3P43003 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.15■□□□□ 0.5
SLC1A3P43003 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A3P43003 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A3P43003 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC1A3P43003 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A3P43003 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC1A3P43003 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A3P43003 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC1A3P43003 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC1A3P43003 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.14■□□□□ 0.49
SLC1A3P43003 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC1A3P43003 AC091874.3-201ENST00000512672 1195 ntBASIC18.14■□□□□ 0.49
SLC1A3P43003 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC1A3P43003 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A3P43003 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A3P43003 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC1A3P43003 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A3P43003 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLC1A3P43003 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A3P43003 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SLC1A3P43003 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A3P43003 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.13■□□□□ 0.49
SLC1A3P43003 TMEM179-206ENST00000616017 1645 ntBASIC18.13■□□□□ 0.49
SLC1A3P43003 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SLC1A3P43003 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.13■□□□□ 0.49
SLC1A3P43003 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 AL109923.1-201ENST00000618799 583 ntBASIC18.13■□□□□ 0.49
SLC1A3P43003 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A3P43003 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A3P43003 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A3P43003 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A3P43003 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A3P43003 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A3P43003 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A3P43003 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SLC1A3P43003 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC1A3P43003 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC1A3P43003 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A3P43003 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC1A3P43003 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC1A3P43003 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A3P43003 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A3P43003 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A3P43003 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SLC1A3P43003 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms