Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PF4V1P10720 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PF4V1P10720 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 KRT8P17-201ENST00000453110 1448 ntBASIC15.65■□□□□ 0.1
PF4V1P10720 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PF4V1P10720 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PF4V1P10720 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PF4V1P10720 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
PF4V1P10720 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.64■□□□□ 0.09
PF4V1P10720 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
PF4V1P10720 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.64■□□□□ 0.09
PF4V1P10720 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PF4V1P10720 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.64■□□□□ 0.09
PF4V1P10720 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.64■□□□□ 0.09
PF4V1P10720 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PF4V1P10720 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PF4V1P10720 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.64■□□□□ 0.09
PF4V1P10720 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.64■□□□□ 0.09
PF4V1P10720 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.64■□□□□ 0.09
PF4V1P10720 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.64■□□□□ 0.09
PF4V1P10720 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.64■□□□□ 0.09
PF4V1P10720 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PF4V1P10720 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.64■□□□□ 0.09
PF4V1P10720 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.64■□□□□ 0.09
PF4V1P10720 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PF4V1P10720 AP005212.1-201ENST00000581547 1997 ntBASIC15.64■□□□□ 0.09
PF4V1P10720 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 PRKY-204ENST00000533551 1019 ntBASIC15.63■□□□□ 0.09
PF4V1P10720 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PF4V1P10720 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.63■□□□□ 0.09
PF4V1P10720 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.63■□□□□ 0.09
PF4V1P10720 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.63■□□□□ 0.09
PF4V1P10720 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PF4V1P10720 AL023875.1-201ENST00000640777 796 ntBASIC15.63■□□□□ 0.09
PF4V1P10720 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 PTBP1P-201ENST00000554374 1601 ntBASIC15.63■□□□□ 0.09
PF4V1P10720 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PF4V1P10720 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PF4V1P10720 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.63■□□□□ 0.09
PF4V1P10720 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.62■□□□□ 0.09
PF4V1P10720 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.62■□□□□ 0.09
PF4V1P10720 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 AC092667.1-201ENST00000434301 2586 ntBASIC15.62■□□□□ 0.09
PF4V1P10720 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.62■□□□□ 0.09
PF4V1P10720 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PF4V1P10720 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PF4V1P10720 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PF4V1P10720 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms