Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CACNA1FO60840 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CACNA1FO60840 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.01■■□□□ 1.59
CACNA1FO60840 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CACNA1FO60840 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CACNA1FO60840 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CACNA1FO60840 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC25.01■■□□□ 1.59
CACNA1FO60840 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25■■□□□ 1.59
CACNA1FO60840 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25■■□□□ 1.59
CACNA1FO60840 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CACNA1FO60840 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25■■□□□ 1.59
CACNA1FO60840 PENK-204ENST00000518770 863 ntTSL 2 BASIC25■■□□□ 1.59
CACNA1FO60840 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25■■□□□ 1.59
CACNA1FO60840 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25■■□□□ 1.59
CACNA1FO60840 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25■■□□□ 1.59
CACNA1FO60840 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
CACNA1FO60840 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC25■■□□□ 1.59
CACNA1FO60840 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CACNA1FO60840 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25■■□□□ 1.59
CACNA1FO60840 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25■■□□□ 1.59
CACNA1FO60840 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CACNA1FO60840 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25■■□□□ 1.59
CACNA1FO60840 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25■■□□□ 1.59
CACNA1FO60840 KSR1P1-201ENST00000446298 240 ntBASIC25■■□□□ 1.59
CACNA1FO60840 AC026271.3-201ENST00000571884 352 ntBASIC25■■□□□ 1.59
CACNA1FO60840 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25■■□□□ 1.59
CACNA1FO60840 MIR4497-201ENST00000583208 89 ntBASIC25■■□□□ 1.59
CACNA1FO60840 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25■■□□□ 1.59
CACNA1FO60840 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CACNA1FO60840 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25■■□□□ 1.59
CACNA1FO60840 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CACNA1FO60840 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CACNA1FO60840 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CACNA1FO60840 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
CACNA1FO60840 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.99■■□□□ 1.59
CACNA1FO60840 MIR718-201ENST00000390190 70 ntBASIC24.99■■□□□ 1.59
CACNA1FO60840 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.99■■□□□ 1.59
CACNA1FO60840 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.99■■□□□ 1.59
CACNA1FO60840 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.99■■□□□ 1.59
CACNA1FO60840 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.99■■□□□ 1.59
CACNA1FO60840 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CACNA1FO60840 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CACNA1FO60840 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.98■■□□□ 1.59
CACNA1FO60840 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.98■■□□□ 1.59
CACNA1FO60840 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.98■■□□□ 1.59
CACNA1FO60840 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.98■■□□□ 1.59
CACNA1FO60840 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.98■■□□□ 1.59
CACNA1FO60840 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.98■■□□□ 1.59
CACNA1FO60840 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.98■■□□□ 1.59
CACNA1FO60840 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
CACNA1FO60840 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
CACNA1FO60840 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.98■■□□□ 1.59
CACNA1FO60840 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
CACNA1FO60840 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.98■■□□□ 1.59
CACNA1FO60840 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.98■■□□□ 1.59
CACNA1FO60840 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.98■■□□□ 1.59
CACNA1FO60840 AC113410.3-201ENST00000623366 203 ntBASIC24.98■■□□□ 1.59
CACNA1FO60840 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CACNA1FO60840 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CACNA1FO60840 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.97■■□□□ 1.59
CACNA1FO60840 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.97■■□□□ 1.59
CACNA1FO60840 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.97■■□□□ 1.59
CACNA1FO60840 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CACNA1FO60840 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CACNA1FO60840 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.96■■□□□ 1.59
CACNA1FO60840 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.96■■□□□ 1.59
CACNA1FO60840 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.96■■□□□ 1.59
CACNA1FO60840 AF186192.3-201ENST00000583427 947 ntBASIC24.96■■□□□ 1.59
CACNA1FO60840 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CACNA1FO60840 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.96■■□□□ 1.59
CACNA1FO60840 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CACNA1FO60840 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.96■■□□□ 1.59
CACNA1FO60840 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CACNA1FO60840 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CACNA1FO60840 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CACNA1FO60840 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CACNA1FO60840 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.96■■□□□ 1.59
CACNA1FO60840 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
CACNA1FO60840 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CACNA1FO60840 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
CACNA1FO60840 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms