Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF2O60811 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF2O60811 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PRAMEF2O60811 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PRAMEF2O60811 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF2O60811 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF2O60811 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
PRAMEF2O60811 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF2O60811 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF2O60811 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 AC120498.8-201ENST00000614275 531 ntBASIC18.55■□□□□ 0.56
PRAMEF2O60811 AC006557.6-201ENST00000623071 864 ntBASIC18.55■□□□□ 0.56
PRAMEF2O60811 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRAMEF2O60811 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEF2O60811 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 TCF3P1-201ENST00000423021 1937 ntBASIC18.54■□□□□ 0.56
PRAMEF2O60811 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PRAMEF2O60811 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEF2O60811 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.53■□□□□ 0.56
PRAMEF2O60811 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEF2O60811 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF2O60811 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms