Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 UNC93B2-201ENST00000285383 730 ntBASIC19.6■□□□□ 0.73
PCDHGA12O60330 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA12O60330 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA12O60330 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.59■□□□□ 0.73
PCDHGA12O60330 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 AP002982.1-201ENST00000492365 877 ntBASIC19.59■□□□□ 0.73
PCDHGA12O60330 KRT18P35-201ENST00000510488 1269 ntBASIC19.59■□□□□ 0.73
PCDHGA12O60330 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 MIR6786-201ENST00000616843 113 ntBASIC19.59■□□□□ 0.73
PCDHGA12O60330 AC005363.2-201ENST00000618631 242 ntBASIC19.59■□□□□ 0.73
PCDHGA12O60330 AL590326.2-201ENST00000625139 305 ntBASIC19.59■□□□□ 0.73
PCDHGA12O60330 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA12O60330 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA12O60330 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA12O60330 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA12O60330 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA12O60330 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA12O60330 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGA12O60330 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGA12O60330 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA12O60330 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGA12O60330 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA12O60330 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA12O60330 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHGA12O60330 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
PCDHGA12O60330 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHGA12O60330 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGA12O60330 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA12O60330 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.72
PCDHGA12O60330 REXO1L10P-201ENST00000615707 1290 ntBASIC19.58■□□□□ 0.72
PCDHGA12O60330 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHGA12O60330 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA12O60330 MIR2861-201ENST00000636310 90 ntBASIC19.58■□□□□ 0.72
PCDHGA12O60330 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA12O60330 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA12O60330 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGA12O60330 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA12O60330 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA12O60330 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 AC079598.2-202ENST00000546624 1451 ntBASIC19.57■□□□□ 0.72
PCDHGA12O60330 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA12O60330 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA12O60330 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA12O60330 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA12O60330 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA12O60330 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA12O60330 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGA12O60330 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGA12O60330 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA12O60330 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA12O60330 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA12O60330 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA12O60330 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA12O60330 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 AL049597.2-201ENST00000565575 961 ntBASIC19.56■□□□□ 0.72
PCDHGA12O60330 AL031963.3-201ENST00000606441 850 ntBASIC19.56■□□□□ 0.72
PCDHGA12O60330 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms