Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.16■□□□□ 0.34
XRCC2O43543 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.16■□□□□ 0.34
XRCC2O43543 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.16■□□□□ 0.34
XRCC2O43543 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC2O43543 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC2O43543 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC2O43543 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC2O43543 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
XRCC2O43543 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.16■□□□□ 0.34
XRCC2O43543 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
XRCC2O43543 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
XRCC2O43543 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
XRCC2O43543 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC2O43543 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.15■□□□□ 0.34
XRCC2O43543 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
XRCC2O43543 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 AC091874.3-201ENST00000512672 1195 ntBASIC17.15■□□□□ 0.34
XRCC2O43543 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC2O43543 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.15■□□□□ 0.34
XRCC2O43543 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.15■□□□□ 0.34
XRCC2O43543 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC2O43543 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.15■□□□□ 0.34
XRCC2O43543 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.15■□□□□ 0.34
XRCC2O43543 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC2O43543 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.15■□□□□ 0.34
XRCC2O43543 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
XRCC2O43543 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC2O43543 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
XRCC2O43543 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC2O43543 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC2O43543 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC2O43543 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC2O43543 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
XRCC2O43543 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC2O43543 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
XRCC2O43543 AC073210.2-201ENST00000430369 194 ntBASIC17.14■□□□□ 0.33
XRCC2O43543 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
XRCC2O43543 GUSBP6-202ENST00000438529 1198 ntBASIC17.14■□□□□ 0.33
XRCC2O43543 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC2O43543 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC2O43543 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC2O43543 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC2O43543 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC2O43543 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC2O43543 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
XRCC2O43543 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC2O43543 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
XRCC2O43543 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.14■□□□□ 0.33
XRCC2O43543 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC2O43543 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
XRCC2O43543 AC087289.5-201ENST00000586076 3175 ntBASIC17.14■□□□□ 0.33
XRCC2O43543 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.13■□□□□ 0.33
XRCC2O43543 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.13■□□□□ 0.33
XRCC2O43543 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
XRCC2O43543 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.13■□□□□ 0.33
XRCC2O43543 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.13■□□□□ 0.33
XRCC2O43543 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.13■□□□□ 0.33
XRCC2O43543 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
XRCC2O43543 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
XRCC2O43543 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.13■□□□□ 0.33
XRCC2O43543 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
XRCC2O43543 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.13■□□□□ 0.33
XRCC2O43543 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.13■□□□□ 0.33
XRCC2O43543 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC2O43543 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.12■□□□□ 0.33
XRCC2O43543 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.12■□□□□ 0.33
XRCC2O43543 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.12■□□□□ 0.33
XRCC2O43543 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.12■□□□□ 0.33
XRCC2O43543 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.12■□□□□ 0.33
XRCC2O43543 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms