Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 AL121906.2-201ENST00000621597 723 ntBASIC17.53■□□□□ 0.4
NPIPB4C9JG80 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPB4C9JG80 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.52■□□□□ 0.4
NPIPB4C9JG80 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPIPB4C9JG80 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPB4C9JG80 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPB4C9JG80 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPB4C9JG80 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NPIPB4C9JG80 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPB4C9JG80 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPIPB4C9JG80 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 RPS2P52-201ENST00000469610 820 ntBASIC17.51■□□□□ 0.39
NPIPB4C9JG80 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 AC090192.1-201ENST00000517740 490 ntBASIC17.51■□□□□ 0.39
NPIPB4C9JG80 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 AC098934.4-201ENST00000564127 592 ntBASIC17.51■□□□□ 0.39
NPIPB4C9JG80 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.51■□□□□ 0.39
NPIPB4C9JG80 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NPIPB4C9JG80 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.5■□□□□ 0.39
NPIPB4C9JG80 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 AC006557.6-201ENST00000623071 864 ntBASIC17.5■□□□□ 0.39
NPIPB4C9JG80 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPIPB4C9JG80 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 AC120498.8-201ENST00000614275 531 ntBASIC17.49■□□□□ 0.39
NPIPB4C9JG80 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPB4C9JG80 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms