Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC092745.2-202ENST00000411880 369 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC138393.2-201ENST00000414742 246 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 MTATP6P27-201ENST00000416987 621 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC015983.1-201ENST00000441577 373 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 RAB11AP1-201ENST00000442978 646 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL7L1P11-201ENST00000446092 721 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AL672167.3-201ENST00000465951 960 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 MAST4-IT1-201ENST00000514241 658 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 SETP21-201ENST00000514799 892 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 RNU7-179P-201ENST00000516608 68 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 OR4A11P-201ENST00000529557 906 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC104383.1-201ENST00000530297 370 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC006504.3-201ENST00000586818 523 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 SLC6A21P-201ENST00000599458 369 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 SEPT7P9-203ENST00000604116 343 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AL021808.1-201ENST00000604325 1117 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC018816.2-201ENST00000621460 353 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 LYARP1-201ENST00000436977 1501 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 MAPK10-319ENST00000641459 2542 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 XRCC6P2-201ENST00000457831 1822 ntBASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 PABPC1P9-201ENST00000426076 1612 ntBASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 FLJ42393-201ENST00000623801 2270 ntBASIC7.71□□□□□ -1.17
PCDHGA11Q9Y5H2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-181P-201ENST00000363225 107 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-501P-201ENST00000364072 100 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-660P-201ENST00000364566 109 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SKP226-201ENST00000364912 300 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC234778.1-201ENST00000399253 370 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SKP59-201ENST00000410520 314 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL36P1-201ENST00000419720 225 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 NEFLP1-201ENST00000436364 984 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 UBE2V1P3-201ENST00000439651 417 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 TXNP3-201ENST00000454560 301 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SL621P-201ENST00000472565 299 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AL122013.1-201ENST00000473054 801 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC092989.1-201ENST00000481235 277 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AL449212.1-201ENST00000499853 517 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 CDH12P2-201ENST00000504393 298 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 GSTO3P-201ENST00000504733 718 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms