Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC114947.2-201ENST00000565748 2125 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 AC017104.4-201ENST00000636283 1592 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RNA5SP335-201ENST00000363817 110 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RNU4-2-201ENST00000365668 141 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RPS3AP23-201ENST00000401762 784 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 MTND6P1-201ENST00000417434 424 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RPL5P25-201ENST00000441148 775 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 COX6B1P5-201ENST00000509843 249 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 BGLT3-201ENST00000564523 994 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 MIR6830-201ENST00000636015 70 ntBASIC2.39□□□□□ -2.03
MACF1Q9UPN3 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC2.39□□□□□ -2.03
MACF1Q9UPN3 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MIR634-201ENST00000385208 97 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC004232.3-201ENST00000622977 525 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC093278.2-201ENST00000564956 2485 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AL450992.3-201ENST00000413192 568 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 RN7SL690P-201ENST00000582087 240 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AL354718.1-201ENST00000619764 589 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC007938.2-201ENST00000604666 2634 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 OR55B1P-203ENST00000641518 2602 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MIR483-201ENST00000385070 76 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 TRAV35-201ENST00000390462 330 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 RPS3AP38-201ENST00000435889 763 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC016144.1-201ENST00000548175 1087 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms