Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL139384.2-201ENST00000613809 3590 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC127024.8-201ENST00000623719 2094 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 RNA5SP65-201ENST00000363166 119 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 RNU1-85P-201ENST00000364127 164 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 RPL7AP28-201ENST00000464513 571 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 RPS21P4-201ENST00000487122 248 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 DSTNP2-201ENST00000504533 515 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC020910.2-201ENST00000603635 610 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 IL24-207ENST00000611909 1621 ntTSL 3 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 SRRM1P3-201ENST00000426911 2678 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 RBMY2QP-201ENST00000429799 1147 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 RPL23AP83-201ENST00000434984 473 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC016144.1-201ENST00000548175 1087 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC007204.2-201ENST00000615022 616 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC007114.2-201ENST00000576014 4281 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC018809.2-201ENST00000602436 3823 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AL136531.3-201ENST00000624378 3658 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC089998.1-201ENST00000548575 3141 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 SELENOWP1-201ENST00000322792 252 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 FTLP8-201ENST00000446770 267 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 RPS4XP23-201ENST00000487801 237 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 RN7SL561P-201ENST00000488553 281 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AC106800.2-201ENST00000514009 1103 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 MIR4429-201ENST00000580105 73 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AP001521.2-201ENST00000608772 546 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 AL121890.2-201ENST00000617644 465 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 CYP4F35P-202ENST00000636121 390 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 LINC01739-205ENST00000641890 573 ntBASIC5.68□□□□□ -1.5
CHD8Q9HCK8 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.68□□□□□ -1.5
CHD8Q9HCK8 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 RN7SKP104-201ENST00000362605 328 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 RPS4XP9-201ENST00000405151 780 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 RN7SL354P-201ENST00000469282 294 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC083982.1-201ENST00000485679 344 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 FXNP1-201ENST00000555153 337 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC068790.4-201ENST00000602474 263 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 MIR7159-201ENST00000620587 66 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 MRPL57P1-201ENST00000621486 265 ntBASIC5.67□□□□□ -1.5
CHD8Q9HCK8 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHD8Q9HCK8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms