Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 NPM1P23-201ENST00000440193 849 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 VPS25P1-201ENST00000455691 508 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 MARK2P8-201ENST00000476069 952 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 OR9A1P-202ENST00000484361 945 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC139713.1-202ENST00000512366 460 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 RNU6-760P-201ENST00000516078 97 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 IGHV4-55-201ENST00000520889 368 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 OR4V1P-201ENST00000525394 1140 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC012414.2-201ENST00000559474 187 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 OR4H6P-201ENST00000563771 921 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC036176.3-201ENST00000602456 418 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC073046.2-201ENST00000604756 527 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 SNORA74.4-201ENST00000607595 199 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 U91328.4-201ENST00000608919 517 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 MIR6883-201ENST00000614952 78 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AL162233.1-201ENST00000620014 944 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC135068.11-201ENST00000636378 921 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 TMCC1P1-201ENST00000518897 1980 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 GUCY1B2-204ENST00000531898 1979 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 AC130360.2-201ENST00000533477 1556 ntBASIC6.09□□□□□ -1.43
BRF2Q9HAW0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRF2Q9HAW0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRF2Q9HAW0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRF2Q9HAW0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 OR11H13P-201ENST00000359695 979 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 OR13C3-201ENST00000374781 1108 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 SNORD94-201ENST00000386037 137 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 ST13P16-201ENST00000401760 781 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 VIM2P-201ENST00000402383 1294 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 SETP9-201ENST00000423837 832 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 BMP6P1-201ENST00000431230 679 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AL445991.1-201ENST00000450381 475 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC063955.1-201ENST00000462872 685 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 RN7SL221P-201ENST00000466190 281 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 RN7SL643P-201ENST00000471845 291 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC018639.1-201ENST00000492994 442 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC122714.1-201ENST00000502510 459 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 SUMO2P4-201ENST00000504193 276 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 OR9G2P-201ENST00000533326 880 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC074029.2-201ENST00000551045 634 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 MIR3908-201ENST00000579798 126 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AL021368.3-201ENST00000607119 578 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AL023583.1-201ENST00000607518 1143 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.08□□□□□ -1.44
BRF2Q9HAW0 MIR7159-201ENST00000620587 66 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC068213.1-201ENST00000625124 226 ntBASIC6.08□□□□□ -1.44
BRF2Q9HAW0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms