Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 VIM2P-201ENST00000402383 1294 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC245096.1-201ENST00000413104 546 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 RPL21P50-201ENST00000417698 477 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC105391.1-201ENST00000503155 1045 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 OR4D12P-201ENST00000509361 911 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 KHDC1P1-201ENST00000511053 508 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 OR8Q1P-201ENST00000526467 655 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC007346.2-201ENST00000564816 892 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC006115.2-201ENST00000596823 202 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AP003108.4-201ENST00000623917 878 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC099654.15-201ENST00000639802 509 ntBASIC7.38□□□□□ -1.23
UPF2Q9HAU5 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF2Q9HAU5 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 SAMM50P1-201ENST00000455403 1399 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC083837.1-201ENST00000565297 2994 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 RNA5SP453-201ENST00000362503 119 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 RNA5SP302-201ENST00000364896 100 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 SNORA7A-201ENST00000384765 139 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 NME1P1-201ENST00000420914 382 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC002127.1-201ENST00000421305 225 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 POU5F1P5-201ENST00000445059 658 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 RSU1P1-201ENST00000453416 441 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC008868.1-201ENST00000509786 737 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC008055.1-201ENST00000547032 609 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 FXYD6P1-201ENST00000604857 285 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AL591167.1-201ENST00000607321 456 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC012511.1-201ENST00000608140 449 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 SNX18P12-201ENST00000624821 759 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 AC079776.5-201ENST00000641920 211 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 CDY3P-201ENST00000454543 1618 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UPF2Q9HAU5 CASC19-260ENST00000641828 2001 ntBASIC7.37□□□□□ -1.23
UPF2Q9HAU5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 U3.10-201ENST00000364459 214 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 RPL11P3-201ENST00000395256 523 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 OR5W1P-201ENST00000423705 938 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 AL138479.1-201ENST00000426913 484 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 AK3P5-201ENST00000432033 519 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 GTF3AP6-201ENST00000432585 986 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 AC112492.2-201ENST00000432774 1030 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 RPS10P14-201ENST00000440748 502 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.36□□□□□ -1.23
UPF2Q9HAU5 Z83838.1-202ENST00000456225 839 ntBASIC7.36□□□□□ -1.23
UPF2Q9HAU5 RPL12P31-201ENST00000478433 450 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms