Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC112243.1-201ENST00000623949 3851 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 SLC20A1P1-201ENST00000413906 956 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 RPL36P18-201ENST00000419316 318 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 TRIM60P16-201ENST00000444048 694 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC073109.1-201ENST00000445066 978 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 RN7SL221P-201ENST00000466190 281 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AL021368.3-201ENST00000607119 578 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 TCL6_3.1-201ENST00000619064 137 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AL357562.1-201ENST00000624911 609 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 AC009135.2-201ENST00000624136 1768 ntBASIC6.62□□□□□ -1.35
NXF3Q9H4D5 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.62□□□□□ -1.35
NXF3Q9H4D5 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AL391261.1-201ENST00000555712 1479 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC096921.2-201ENST00000561507 1916 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 RPS15AP30-201ENST00000420976 390 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 GAPDHP75-201ENST00000433910 943 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 NDUFS5P5-201ENST00000437256 321 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC103563.5-201ENST00000455643 364 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC068522.1-201ENST00000482895 345 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 SCARNA18.1-201ENST00000516330 83 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC067852.5-201ENST00000589299 310 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC008521.2-201ENST00000591021 259 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC024589.2-201ENST00000605642 1294 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AL355480.1-201ENST00000629041 99 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 AC003992.1-201ENST00000635364 557 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 BRD7P6-201ENST00000431406 1860 ntBASIC6.61□□□□□ -1.35
NXF3Q9H4D5 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NXF3Q9H4D5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 OR52B5P-204ENST00000641744 3467 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 RNA5SP510-201ENST00000364697 99 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 RPS14P4-201ENST00000415880 418 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 RPL12P12-201ENST00000424633 501 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AL022237.1-201ENST00000446663 358 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AL445466.1-201ENST00000448432 357 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms