Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 RNU105B-201ENST00000364478 208 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 RNA5SP485-201ENST00000365053 119 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 CXADRP1-201ENST00000398098 1095 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AL096800.1-201ENST00000405326 893 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 VN1R20P-201ENST00000425215 966 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 RPS12P17-201ENST00000438591 377 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC234771.2-201ENST00000445718 597 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 ZNF619P1-201ENST00000446539 752 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC116917.1-201ENST00000520558 305 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 CYCSP25-201ENST00000525280 316 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AL136097.3-201ENST00000611097 505 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AL352984.2-201ENST00000611153 546 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AC016590.3-201ENST00000611171 753 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 CXADRP3-202ENST00000617265 1100 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AL357562.1-201ENST00000624911 609 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 AL355480.1-201ENST00000629041 99 ntBASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO3Q9BXY4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RSPO3Q9BXY4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.59□□□□□ -1.52
RSPO3Q9BXY4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
RSPO3Q9BXY4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
RSPO3Q9BXY4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 VN1R12P-201ENST00000403778 876 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AL096711.1-201ENST00000404780 554 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC021876.1-201ENST00000425959 359 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC010086.1-201ENST00000437359 1052 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC099670.1-201ENST00000455141 783 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 snoU13.29-201ENST00000459370 104 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 HMGN1P17-201ENST00000513734 295 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AP003033.2-201ENST00000528901 805 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AP005136.2-201ENST00000583253 1049 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC011891.2-201ENST00000604949 397 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 uc_338.26-201ENST00000612659 160 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC096861.1-201ENST00000616652 240 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 AC010329.1-201ENST00000593903 8328 ntBASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RSPO3Q9BXY4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RSPO3Q9BXY4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms