Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNORA7B-201ENST00000384360 139 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 SNORA7A-201ENST00000384765 139 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 Y_RNA.582-201ENST00000391023 95 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC026310.1-201ENST00000396004 378 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 CCNG1P1-201ENST00000406783 885 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RAC1P8-201ENST00000427086 527 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC069154.1-201ENST00000432914 542 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 MTND3P1-201ENST00000441336 220 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RPL7P36-201ENST00000444633 681 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RPL36AP33-201ENST00000450395 310 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC013267.1-201ENST00000458227 267 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RN7SL160P-201ENST00000468558 284 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 MTND6P6-201ENST00000478031 263 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AL358832.1-201ENST00000497800 389 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC008638.1-201ENST00000506035 866 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 CCDC34P1-201ENST00000507441 517 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 IGBP1P5-201ENST00000507524 1000 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC010368.1-201ENST00000510160 456 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC133963.2-201ENST00000513686 578 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC010342.1-201ENST00000514047 877 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AP006296.1-201ENST00000537438 499 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AADACP1-206ENST00000561502 1193 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 MIR6768-201ENST00000610734 72 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 MIR6721-201ENST00000617181 87 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC089999.3-201ENST00000622440 577 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 BX284613.1-201ENST00000452221 1641 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC087565.3-202ENST00000642085 1603 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 OR2AH1P-202ENST00000641232 2744 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 AC137056.2-201ENST00000624055 1958 ntBASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL25A1Q9BXS0 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC092375.2-201ENST00000567370 1665 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL136298.2-201ENST00000556497 1570 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL391988.1-201ENST00000614747 1553 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MTND4P14-201ENST00000435799 1354 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LIPC-201ENST00000299022 2751 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 SUGT1P2-201ENST00000379452 992 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 TAF9BP2-201ENST00000400856 499 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 RN7SKP91-201ENST00000410852 288 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 RPS7P13-201ENST00000413955 498 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 BTF3P8-201ENST00000414577 526 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 NCOR1P3-201ENST00000420479 303 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MTND1P28-201ENST00000435623 950 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 MTND3P2-201ENST00000438452 342 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AL590639.1-201ENST00000456484 337 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 RPL5P24-201ENST00000463742 885 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC112484.3-201ENST00000505910 329 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 GUSBP3-201ENST00000509348 423 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 AC110792.2-201ENST00000510278 224 ntBASIC7.76□□□□□ -1.17
COL25A1Q9BXS0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms