Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC140063.1-201ENST00000541343 259 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.46□□□□□ -1.54
SSX3Q99909 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX3Q99909 GTF2IP6-201ENST00000583143 541 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX3Q99909 AC012175.1-201ENST00000603755 531 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 AC006328.2-201ENST00000623198 397 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 AC012005.2-201ENST00000624333 397 ntBASIC5.46□□□□□ -1.54
SSX3Q99909 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX3Q99909 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX3Q99909 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SSX3Q99909 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX3Q99909 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SSX3Q99909 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX3Q99909 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSX3Q99909 AC007342.5-201ENST00000571340 2142 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.45□□□□□ -1.54
SSX3Q99909 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.45□□□□□ -1.54
SSX3Q99909 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 HSPD1P8-201ENST00000400121 1658 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 RNA5SP308-201ENST00000362532 115 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 RNU1-5P-201ENST00000362684 144 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX3Q99909 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.45□□□□□ -1.54
SSX3Q99909 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 FDPSP5-201ENST00000399474 1057 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AL663061.1-201ENST00000416625 580 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.45□□□□□ -1.54
SSX3Q99909 MTCO1P51-201ENST00000427672 1060 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 RPL5P2-201ENST00000429598 854 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX3Q99909 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AL157385.1-201ENST00000446973 268 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.45□□□□□ -1.54
SSX3Q99909 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX3Q99909 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX3Q99909 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 AKR1D1P1-201ENST00000457236 936 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 RN7SL393P-201ENST00000463588 296 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 RN7SL83P-201ENST00000468131 297 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 RPS3AP49-201ENST00000472161 790 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 RPL7AP23-201ENST00000482625 776 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AC021146.11-201ENST00000503319 491 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AC114324.2-202ENST00000503812 134 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AC021220.1-201ENST00000507445 630 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 NACAP5-201ENST00000509863 636 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AC091849.1-201ENST00000509920 121 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 AC022784.5-201ENST00000522241 437 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 BTG1P1-201ENST00000540396 508 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SSX3Q99909 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX3Q99909 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
SSX3Q99909 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX3Q99909 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX3Q99909 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX3Q99909 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX3Q99909 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.45□□□□□ -1.54
SSX3Q99909 AC120057.5-201ENST00000623840 154 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX3Q99909 OR7A1P-202ENST00000641542 1158 ntBASIC5.45□□□□□ -1.54
SSX3Q99909 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX3Q99909 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSX3Q99909 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX3Q99909 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SSX3Q99909 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC007485.2-201ENST00000623493 1667 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SSX3Q99909 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
SSX3Q99909 AC010894.1-201ENST00000313760 361 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 RNA5SP65-201ENST00000363166 119 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 AL353625.1-202ENST00000366273 571 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 GAPDHP15-201ENST00000398586 975 ntBASIC5.44□□□□□ -1.54
SSX3Q99909 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX3Q99909 SEPT7P8-201ENST00000413308 775 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms