Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 NACAP5-201ENST00000509863 636 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 RNA5SP206-201ENST00000516703 121 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 HMGN1P26-201ENST00000558737 303 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AP005901.4-201ENST00000577336 569 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC020916.2-201ENST00000591242 360 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC011891.2-201ENST00000604949 397 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 U1.25-201ENST00000614085 162 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 U1.34-201ENST00000618578 162 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 U1.31-201ENST00000620022 160 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC089999.3-201ENST00000622440 577 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC024651.2-201ENST00000562480 2098 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 AC011416.1-201ENST00000514947 1732 ntBASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDLIM5Q96HC4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC114876.1-201ENST00000490962 1366 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AL356968.2-201ENST00000412769 1257 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 MRPS21P3-201ENST00000436696 262 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AL133351.3-201ENST00000454998 193 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC112187.1-201ENST00000455837 479 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC016687.1-201ENST00000482574 353 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 SNRPCP11-201ENST00000492453 205 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 LDHAP1-201ENST00000509421 992 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC036111.2-201ENST00000533247 901 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 GLYATL1P2-202ENST00000588046 902 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AL583832.1-201ENST00000603227 784 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 QTRT1P1-201ENST00000604344 1078 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AP005212.4-201ENST00000614206 710 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 AL138693.1-201ENST00000622219 129 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 MAPK10-261ENST00000641050 3109 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 CUL4AP1-201ENST00000514750 1863 ntBASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.07□□□□□ -1.44
PDLIM5Q96HC4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 RNA5SP77-201ENST00000365394 120 ntBASIC6.06□□□□□ -1.44
PDLIM5Q96HC4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms