Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC119674.1-204ENST00000641348 1343 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 SNORD16-201ENST00000362803 99 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 RNA5SP510-201ENST00000364697 99 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 SNORA51.9-201ENST00000384295 124 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC066692.1-201ENST00000421721 457 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 MORF4L1P5-201ENST00000433352 961 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AP000949.1-201ENST00000438328 629 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC097463.1-201ENST00000447288 481 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 HLA-DPA3-207ENST00000454398 229 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AL133351.3-201ENST00000454998 193 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC084754.1-201ENST00000463466 464 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC023194.2-201ENST00000465398 406 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 RPL23AP64-201ENST00000469465 435 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 RPL7P51-201ENST00000490532 749 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC063943.2-201ENST00000495697 534 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 LSM3P4-201ENST00000502948 309 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC011411.1-201ENST00000509592 876 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 NANOGNBP2-201ENST00000544753 553 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 FXNP1-201ENST00000555153 337 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC012146.2-201ENST00000576545 416 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 MIR4701-201ENST00000583094 63 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 AC007406.5-201ENST00000570140 3170 ntBASIC6.44□□□□□ -1.38
HMGB4Q8WW32 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGB4Q8WW32 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AL031651.1-201ENST00000615357 1438 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 CDY11P-201ENST00000447168 1651 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 RNU6-152P-201ENST00000384037 107 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC096537.2-201ENST00000413707 714 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC013470.3-201ENST00000420252 1194 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 SOCS5P1-201ENST00000440415 949 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 ATP5LP2-201ENST00000440646 311 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 PPIAP27-201ENST00000453800 265 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 RN7SL643P-201ENST00000471845 291 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 RPL12P31-201ENST00000478433 450 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms