Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 WDR95P-201ENST00000425638 1542 ntBASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC71LQ8N9Z2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 SNORD35A-201ENST00000363389 86 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 RN7SKP128-201ENST00000364270 303 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 RNA5SP140-201ENST00000364524 92 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 SNORA43.1-201ENST00000364863 140 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC019178.1-201ENST00000392337 440 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 VN1R53P-201ENST00000429536 957 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 PHBP4-201ENST00000437447 837 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 RPL23AP60-201ENST00000450011 454 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 UOX-201ENST00000471089 899 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 RPL5P3-201ENST00000493817 889 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC106760.2-201ENST00000504159 619 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 RPL7L1P7-201ENST00000509986 724 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC097486.1-201ENST00000515331 210 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 snoU109.5-201ENST00000516231 132 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 SCARNA11.1-201ENST00000516918 132 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 IGHV4-55-201ENST00000520889 368 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 TPM3P3-201ENST00000521343 354 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC136777.2-201ENST00000522979 358 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC114477.1-201ENST00000605097 605 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AL161912.3-201ENST00000605404 628 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC005514.1-201ENST00000623521 208 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC027559.1-201ENST00000636288 271 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC099654.6-201ENST00000636487 512 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 OR7A1P-202ENST00000641542 1158 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC010132.4-201ENST00000569883 1368 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC123912.3-201ENST00000600907 1367 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC005702.3-201ENST00000585345 1447 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AL136984.1-201ENST00000607611 1893 ntBASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC71LQ8N9Z2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 AC226101.1-201ENST00000401483 387 ntBASIC5.1□□□□□ -1.59
CCDC71LQ8N9Z2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms