Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 Y_RNA.62-201ENST00000362840 99 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 RNA5SP242-201ENST00000364171 118 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 RNU6-891P-201ENST00000384280 111 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AL096800.1-201ENST00000405326 893 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 GAPDHP48-201ENST00000436626 961 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 DNAJC19P5-201ENST00000443295 316 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 CST12P-201ENST00000457644 362 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 ACA64.1-201ENST00000459171 127 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 TRBV8-1-201ENST00000481590 279 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 RPL7L1P4-201ENST00000513004 707 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AC005229.3-201ENST00000603438 323 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 CYCSP1-201ENST00000604815 315 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AL513218.1-201ENST00000606527 391 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AC120057.5-201ENST00000623840 154 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.92□□□□□ -1.3
HERC6Q8IVU3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HERC6Q8IVU3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC010329.1-201ENST00000593903 8328 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC006600.2-201ENST00000624834 2506 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC005034.3-201ENST00000604845 1747 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 RNA5SP273-201ENST00000362484 113 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 MIR541-201ENST00000401360 84 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 GTF3AP1-201ENST00000416942 1004 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AL157884.1-201ENST00000424561 454 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 XKRYP6-201ENST00000440468 1116 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 XKRYP3-201ENST00000442113 1116 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AP003396.4-201ENST00000527574 265 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC092375.1-201ENST00000550410 637 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC067805.1-201ENST00000559344 470 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC107993.1-201ENST00000591343 684 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC013244.1-201ENST00000604279 193 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AL512652.1-201ENST00000619006 500 ntBASIC6.91□□□□□ -1.3
HERC6Q8IVU3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HERC6Q8IVU3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms