Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC020923.1-201ENST00000624021 917 ntBASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 AL356094.1-201ENST00000624663 1212 ntBASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 AL132640.3-201ENST00000630473 177 ntBASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 AC010325.3-201ENST00000641084 394 ntBASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 AP002370.1-201ENST00000528055 1602 ntBASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
LRRTM4Q86VH4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.4
LRRTM4Q86VH4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
LRRTM4Q86VH4 AL353743.3-201ENST00000442109 1468 ntBASIC6.34□□□□□ -1.4
LRRTM4Q86VH4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AL591848.4-201ENST00000567832 3472 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 NEK2P2-201ENST00000438441 1338 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 SNORD16-201ENST00000362803 99 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 RNA5SP350-201ENST00000363298 111 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 SNORD65-201ENST00000391079 73 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AL359885.1-201ENST00000415786 903 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AL157884.1-201ENST00000424561 454 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 CCRL1P1-201ENST00000449542 1053 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 GM2AP2-201ENST00000491764 562 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 SUMO2P19-201ENST00000518920 295 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC092868.3-201ENST00000560515 784 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC244034.2-201ENST00000562504 509 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 RN7SL230P-201ENST00000580835 303 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC073046.2-201ENST00000604756 527 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC005828.7-201ENST00000607331 556 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 uc_338.29-201ENST00000615099 168 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 RMST_5.1-201ENST00000618704 126 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 MIR6811-201ENST00000620409 58 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC015722.2-201ENST00000622210 551 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AC011455.2-201ENST00000599320 3336 ntBASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.33□□□□□ -1.4
LRRTM4Q86VH4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 AC130360.2-201ENST00000533477 1556 ntBASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 AC090181.3-201ENST00000624777 1514 ntBASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.32□□□□□ -1.4
LRRTM4Q86VH4 RPL11P4-201ENST00000332269 436 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms