Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP005431.1-201ENST00000618479 319 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 RBPJP7-201ENST00000442803 1447 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 RBPJP5-201ENST00000449433 1447 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 AC022325.1-201ENST00000502748 2199 ntBASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.13□□□□□ -1.43
LYSMD4Q5XG99 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AL050335.1-201ENST00000396909 869 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 NEPNP-201ENST00000404786 1371 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 WDR95P-201ENST00000425638 1542 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC009237.1-201ENST00000442127 744 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 MTCO3P17-201ENST00000443775 513 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 VN1R38P-201ENST00000450265 887 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 RANP2-201ENST00000456833 229 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 RPS27AP2-201ENST00000457576 465 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC026348.1-201ENST00000462549 1053 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 RPS26P39-201ENST00000469206 341 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC124945.1-201ENST00000485133 188 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC008638.1-201ENST00000506035 866 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC002456.2-201ENST00000509356 380 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC091078.2-201ENST00000557145 559 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AP005901.4-201ENST00000577336 569 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 MIR3176-201ENST00000582210 90 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AL359704.2-201ENST00000604335 521 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AL645933.2-201ENST00000606743 1207 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 MIR6809-201ENST00000612189 116 ntBASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.12□□□□□ -1.43
LYSMD4Q5XG99 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 RNA5SP350-201ENST00000363298 111 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 BX510359.3-201ENST00000422168 306 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 AC244033.1-201ENST00000426826 870 ntBASIC6.11□□□□□ -1.43
LYSMD4Q5XG99 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms