Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL121835.1-201ENST00000404250 354 ntBASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 HMGB1P7-201ENST00000450921 612 ntBASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AC114728.1-201ENST00000488289 483 ntBASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 RN7SKP35-201ENST00000517210 151 ntBASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AC119403.2-201ENST00000590960 598 ntBASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AC068768.2-201ENST00000602352 343 ntBASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AC124916.2-201ENST00000604416 224 ntBASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 AC096861.1-201ENST00000616652 240 ntBASIC6.4□□□□□ -1.38
PTPN20Q4JDL3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.4□□□□□ -1.39
PTPN20Q4JDL3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 RNU1-134P-201ENST00000362935 165 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AL451142.1-201ENST00000375867 775 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 SNORA77.2-201ENST00000408571 112 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 RPL5P7-201ENST00000444235 813 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 FTLP8-201ENST00000446770 267 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 EEF1B2P3-201ENST00000447718 678 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC016027.4-201ENST00000450866 277 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 RN7SL352P-201ENST00000466002 277 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 HSD3BP3-201ENST00000514706 994 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 IGKV3D-25-201ENST00000519599 235 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC244502.2-201ENST00000543361 851 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 MIR3154-201ENST00000577829 84 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AL645933.2-201ENST00000606743 1207 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC016590.3-201ENST00000611171 753 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AL357562.1-201ENST00000624911 609 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 RBMY1HP-201ENST00000382759 1389 ntBASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN20Q4JDL3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 AP002833.3-201ENST00000625075 2265 ntBASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 SNORA51.9-201ENST00000384295 124 ntBASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 CLNS1AP1-201ENST00000435954 682 ntBASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 AL353662.1-201ENST00000439099 327 ntBASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 AL162739.1-201ENST00000450606 307 ntBASIC6.38□□□□□ -1.39
PTPN20Q4JDL3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms