Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 AL139384.2-201ENST00000613809 3590 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC062022.1-201ENST00000451026 1684 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 CASC19-228ENST00000641414 1684 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AL136531.3-201ENST00000624378 3658 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
EFNB3Q15768 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 RNU6-1176P-201ENST00000390955 107 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 CCNB2P1-201ENST00000399411 1150 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 NACAP7-201ENST00000407371 609 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 AL139156.3-201ENST00000454802 394 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 RPL23AP64-201ENST00000469465 435 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC108157.1-201ENST00000510511 539 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.54□□□□□ -1.52
EFNB3Q15768 RNA5SP418-201ENST00000515951 117 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 HMGN2P47-201ENST00000559378 272 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AL683813.2-201ENST00000605245 502 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 AL445649.1-201ENST00000615941 691 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 AC012653.2-201ENST00000621880 420 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 LINC00216-201ENST00000623548 1126 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC111152.1-202ENST00000635848 339 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 AL121936.2-201ENST00000641935 662 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.54□□□□□ -1.52
EFNB3Q15768 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.54□□□□□ -1.52
EFNB3Q15768 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.54□□□□□ -1.52
EFNB3Q15768 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.54□□□□□ -1.52
EFNB3Q15768 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 CDY5P-201ENST00000411487 1580 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 CDY9P-201ENST00000451397 1580 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 AC023245.2-201ENST00000530760 2978 ntBASIC5.54□□□□□ -1.52
EFNB3Q15768 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
EFNB3Q15768 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.54□□□□□ -1.52
EFNB3Q15768 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFNB3Q15768 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFNB3Q15768 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EFNB3Q15768 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
EFNB3Q15768 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFNB3Q15768 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EFNB3Q15768 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
EFNB3Q15768 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFNB3Q15768 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.53□□□□□ -1.52
EFNB3Q15768 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
EFNB3Q15768 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFNB3Q15768 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
EFNB3Q15768 RNU6-697P-201ENST00000363348 107 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 RNU6-1331P-201ENST00000363658 106 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 RNA5SP232-201ENST00000364144 119 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.53□□□□□ -1.52
EFNB3Q15768 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.53□□□□□ -1.52
EFNB3Q15768 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFNB3Q15768 MIR621-201ENST00000384919 96 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 VN1R12P-201ENST00000403778 876 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.53□□□□□ -1.52
EFNB3Q15768 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EFNB3Q15768 GTF3AP1-201ENST00000416942 1004 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 MTND2P15-201ENST00000418575 892 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 NME1P1-201ENST00000420914 382 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 ARAFP1-201ENST00000422172 605 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 VN1R20P-201ENST00000425215 966 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 AC023141.6-201ENST00000429418 337 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.53□□□□□ -1.52
EFNB3Q15768 MED28P4-201ENST00000433137 572 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.53□□□□□ -1.52
EFNB3Q15768 EMC3-AS1-205ENST00000438698 534 ntBASIC5.53□□□□□ -1.52
EFNB3Q15768 TXNP2-201ENST00000443918 295 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms