Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 AL672167.1-206ENST00000356293 943 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 PPIAP22-201ENST00000358455 498 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 Y_RNA.359-201ENST00000365498 102 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH1Q08174 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PCDH1Q08174 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 CNN3P1-201ENST00000401596 935 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AL079342.2-201ENST00000403367 482 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 MED15P8-201ENST00000411601 545 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 MTND1P21-201ENST00000412991 285 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 GNAI2P2-201ENST00000417003 916 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC016831.2-201ENST00000417179 352 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDH1Q08174 AL139421.1-201ENST00000423010 169 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH1Q08174 AC009784.1-201ENST00000426484 460 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH1Q08174 WDR82P2-201ENST00000444540 928 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AL590004.3-202ENST00000445883 451 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC234771.3-201ENST00000454984 622 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 EIF3LP2-201ENST00000457262 807 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 RN7SL180P-201ENST00000466769 294 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 RN7SL414P-201ENST00000469545 294 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PCDH1Q08174 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 snoZ278.1-201ENST00000517059 112 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 TBCA-206ENST00000518338 551 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDH1Q08174 OR7E96P-201ENST00000530816 976 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH1Q08174 NUTF2P2-201ENST00000551207 384 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH1Q08174 NMNAT1P5-201ENST00000559657 841 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH1Q08174 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH1Q08174 CYP2C60P-201ENST00000566088 139 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH1Q08174 AC011260.1-201ENST00000578420 472 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDH1Q08174 MIR3689C-201ENST00000581239 72 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 MIR548S-201ENST00000581352 82 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 RN7SL178P-201ENST00000582930 304 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AL590560.2-201ENST00000608430 732 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC012409.3-201ENST00000611343 981 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AC010678.1-201ENST00000614118 713 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 AP003068.4-201ENST00000623192 802 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 AL355480.4-201ENST00000626823 69 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
PCDH1Q08174 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 API5P1-201ENST00000424316 1510 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 AC110716.2-201ENST00000563865 3945 ntBASIC7.25□□□□□ -1.25
PCDH1Q08174 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
PCDH1Q08174 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PCDH1Q08174 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH1Q08174 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PCDH1Q08174 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC004023.1-201ENST00000561473 1744 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
PCDH1Q08174 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC074198.1-201ENST00000506546 1397 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC089998.1-201ENST00000548575 3141 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 PRNCR1-201ENST00000635449 12727 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC000367.1-201ENST00000452711 1766 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AL355852.1-201ENST00000454081 1771 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC018688.1-201ENST00000636528 1754 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms