Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC087894.3-201ENST00000623682 349 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.15□□□□□ -1.42
NKX6-1P78426 AL139254.2-202ENST00000641937 1156 ntBASIC6.15□□□□□ -1.42
NKX6-1P78426 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
NKX6-1P78426 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.15□□□□□ -1.43
NKX6-1P78426 CUBNP3-201ENST00000457461 1784 ntBASIC6.15□□□□□ -1.43
NKX6-1P78426 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.15□□□□□ -1.43
NKX6-1P78426 NEPNP-201ENST00000404786 1371 ntBASIC6.15□□□□□ -1.43
NKX6-1P78426 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.15□□□□□ -1.43
NKX6-1P78426 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.15□□□□□ -1.43
NKX6-1P78426 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 AL356361.1-201ENST00000400943 1459 ntBASIC6.15□□□□□ -1.43
NKX6-1P78426 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.15□□□□□ -1.43
NKX6-1P78426 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.15□□□□□ -1.43
NKX6-1P78426 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.15□□□□□ -1.43
NKX6-1P78426 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.15□□□□□ -1.43
NKX6-1P78426 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.15□□□□□ -1.43
NKX6-1P78426 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NKX6-1P78426 AC090181.3-201ENST00000624777 1514 ntBASIC6.15□□□□□ -1.43
NKX6-1P78426 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AC116158.1-201ENST00000560231 2129 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 AL034403.1-201ENST00000399414 885 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.14□□□□□ -1.43
NKX6-1P78426 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 SNRPEP5-201ENST00000425442 278 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 RPS7P2-201ENST00000435134 607 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.14□□□□□ -1.43
NKX6-1P78426 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.14□□□□□ -1.43
NKX6-1P78426 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 ARF4P4-201ENST00000439608 520 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 MED6P1-201ENST00000439659 713 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AC009237.1-201ENST00000442127 744 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AC239798.3-201ENST00000454459 408 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 MED28P7-201ENST00000456611 530 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 GAPDHP53-201ENST00000458397 924 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AC079193.1-201ENST00000460497 588 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 RN7SL393P-201ENST00000463588 296 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.14□□□□□ -1.43
NKX6-1P78426 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 AL591122.1-201ENST00000487348 492 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 EIF1P7-201ENST00000487533 337 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.14□□□□□ -1.43
NKX6-1P78426 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.14□□□□□ -1.43
NKX6-1P78426 OR5M6P-201ENST00000530227 937 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AC027667.1-201ENST00000545814 304 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 CYB5AP5-201ENST00000549779 389 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 MIR4271-201ENST00000582451 67 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AC084373.1-201ENST00000603311 235 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 RMST_10.1-201ENST00000616309 154 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 CYCSP41-201ENST00000616920 296 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 MIR6849-201ENST00000618543 69 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 U1.34-201ENST00000618578 162 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AL356863.1-201ENST00000623378 1080 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AL078595.3-201ENST00000623815 1166 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 SEPT7P7-201ENST00000420492 1301 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
NKX6-1P78426 AC011815.2-201ENST00000618230 2021 ntBASIC6.14□□□□□ -1.43
NKX6-1P78426 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms