Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC084337.1-201ENST00000524809 686 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCNA1P78396 AC027544.3-201ENST00000535082 757 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 AC090022.1-201ENST00000546569 311 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.08□□□□□ -1.28
CCNA1P78396 AC135626.1-201ENST00000556983 435 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AC091078.2-201ENST00000557145 559 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 AC020978.7-201ENST00000575953 1187 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 NPM1P45-201ENST00000583151 559 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AC009237.12-201ENST00000604755 742 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.08□□□□□ -1.28
CCNA1P78396 AL645933.2-201ENST00000606743 1207 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AC063952.1-203ENST00000634410 658 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.08□□□□□ -1.28
CCNA1P78396 AL049767.1-202ENST00000637826 242 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.08□□□□□ -1.28
CCNA1P78396 ZNF812P-201ENST00000457674 1694 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 AC105235.1-201ENST00000623208 1816 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 AC025809.2-201ENST00000625085 1802 ntBASIC7.08□□□□□ -1.28
CCNA1P78396 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCNA1P78396 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
CCNA1P78396 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CCNA1P78396 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
CCNA1P78396 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.07□□□□□ -1.28
CCNA1P78396 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 NCOA4P3-201ENST00000513203 1877 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 AL669831.5-218ENST00000591702 1873 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 RN7SKP161-201ENST00000411110 305 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 RN7SKP293-201ENST00000411389 296 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 MARK2P12-201ENST00000420129 585 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.07□□□□□ -1.28
CCNA1P78396 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.07□□□□□ -1.28
CCNA1P78396 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.07□□□□□ -1.28
CCNA1P78396 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.07□□□□□ -1.28
CCNA1P78396 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.07□□□□□ -1.28
CCNA1P78396 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.07□□□□□ -1.28
CCNA1P78396 RPSAP37-201ENST00000470913 821 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 AL122020.1-201ENST00000472287 459 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.07□□□□□ -1.28
CCNA1P78396 AC106800.2-201ENST00000514009 1103 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.07□□□□□ -1.28
CCNA1P78396 AC097467.4-201ENST00000605504 141 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 FAM72A-208ENST00000607379 1139 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 MIR6809-201ENST00000612189 116 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 MIR6826-201ENST00000617808 98 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCNA1P78396 AC016251.2-201ENST00000623393 3089 ntBASIC7.07□□□□□ -1.28
CCNA1P78396 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.07□□□□□ -1.28
CCNA1P78396 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.07□□□□□ -1.28
CCNA1P78396 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
CCNA1P78396 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.06□□□□□ -1.28
CCNA1P78396 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
CCNA1P78396 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CCNA1P78396 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
CCNA1P78396 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CCNA1P78396 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
CCNA1P78396 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 MIR143-201ENST00000385300 106 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
CCNA1P78396 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.06□□□□□ -1.28
CCNA1P78396 AL121776.1-201ENST00000429337 372 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.06□□□□□ -1.28
CCNA1P78396 RPL36AP39-201ENST00000445859 318 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 NPM1P19-201ENST00000450070 712 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 RPS27AP2-201ENST00000457576 465 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 SNX18P26-201ENST00000458433 740 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.06□□□□□ -1.28
CCNA1P78396 AL136038.1-201ENST00000497246 351 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.06□□□□□ -1.28
CCNA1P78396 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.06□□□□□ -1.28
CCNA1P78396 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCNA1P78396 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.06□□□□□ -1.28
CCNA1P78396 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.06□□□□□ -1.28
CCNA1P78396 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.06□□□□□ -1.28
CCNA1P78396 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.06□□□□□ -1.28
CCNA1P78396 AL136131.3-201ENST00000607600 188 ntBASIC7.06□□□□□ -1.28
CCNA1P78396 MTND5P12-201ENST00000502851 1449 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms